fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024600 not found in 632aa AT4G29230.1 1st_not 0.443717277 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56620.1     -------------MKN----------------------------SKCNLIDSKLEEHHHL
Sb024600_Sorbi1 LLLRLALRAARRRNKNHPSPITTTHACALPPGAAYEPDMNRGHSSSSKLINEKLEE-HRI
                              **                            *..:**:.**** *::

AT5G56620.1     CGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPL
Sb024600_Sorbi1 STAKHCPHCGEKID--SKPDWVGLPAGVKFDPTDQELIEHLEAKVK-----DEGSRSHPL
                . :**** **. *:  :**:**************************     .: * ****

AT5G56620.1     IDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSE
Sb024600_Sorbi1 IDEFIPTIDGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRK-IQTECDVH
                *******************:****************:**:*********** ***: * .

AT5G56620.1     LTGSSETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEE
Sb024600_Sorbi1 ---KGETRWHKTGKTRPVMVNGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEE
                   ..**************:**:*:**************:*:**************  **

AT5G56620.1     EREGELVVSKIFYQTQPRQCVSNTNWSDHHGSKDVIGIGVGDEISSVAATLQ---SLGSG
Sb024600_Sorbi1 EKEGELVVCKIFYQTQPRQC----SWSSDRGTAATAAMAA----TTMAAQEQHRRDSGSG
                *:******.***********    .**..:*:  . .:..    :::**  *   . ***

AT5G56620.1     DVVSR------------------VNMHPHT-------------RSFDE-----GTAEASK
Sb024600_Sorbi1 SCSSRDHEVSATSFPAGYTVTTAVEMQQHMKQPADHFSFAPFRKTFDQEVGIGGDQVPSN
                .  **                  *:*: *              ::**:     *   .*:

AT5G56620.1     --GRENQHVSGTCEEVHDGIITSSMSS---------------------------------
Sb024600_Sorbi1 QLGRSEPHHAGQGQQPHGPVLSTTTAVPATAFLISRPSNPVSTIVPPEMQHASVVLDHDQ
                  **.: * :*  :: *. ::::: :                                  

AT5G56620.1     --------HHMIHD----HHNQH--HQIGDRR-----EFHMSSSYPMTPTITSQHESIFH
Sb024600_Sorbi1 FHVPAILLHH--HDKFQPQHQQHQPQQKLDRRSAGLEELIMGCT---SSTSTKGETSIAH
                        **  **    :*:**  :*  ***     *: *..:   :.* *. . ** *

AT5G56620.1     VTST---MPFQGSVVWFGIRRPNYGLYHSYVYRRRKFLTNLCI
Sb024600_Sorbi1 PQETEWPYPY-----W----PPDNQDHHG--------------
                  .*    *:     *     *:   :*.
BoxShade v3.31 C (beta, 970507) Output
AT5G56620.1     - - - - - - - - - - - - - M K N - - - - - - - - - - - - - - - - - - - - - - - - - - - - S K C N L I D S K L E E H H H L
Sb024600_Sorbi1    L L L R L A L R A A R R R N K N H P S P I T T T H A C A L P P G A A Y E P D M N R G H S S S S K L I N E K L E E - H R I
 
AT5G56620.1     C G S K H C P G C G R M I Q A A T K P N W V G L P A G V K F D P T D Q E L I E H L E A K V K G K E E N K K W S S S H P L
Sb024600_Sorbi1    S T A K H C P H C G E K I D - - S K P D W V G L P A G V K F D P T D Q E L I E H L E A K V K - - - - - D E G S R S H P L
 
AT5G56620.1     I D E F I P T I D G E D G I C Y T H P Q K L P G V T R D G L S K H F F H K P S R A Y T T G T R K R R K I I Q T D H D S E
Sb024600_Sorbi1    I D E F I P T I D G E D G I C Y T H P E K L P G V T R D G L S K H F F H R P S K A Y T T G T R K R R K - I Q T E C D V H
 
AT5G56620.1     L T G S S E T R W H K T G K T R P V M I N G Q Q R G C K K I L V L Y T N F G K N R R P E K T N W V M H Q Y H L G I N E E
Sb024600_Sorbi1    - - - K G E T R W H K T G K T R P V M V N G R Q K G C K K I L V L Y T N F G K H R K P E K T N W V M H Q Y H L G D L E E
 
AT5G56620.1     E R E G E L V V S K I F Y Q T Q P R Q C V S N T N W S D H H G S K D V I G I G V G D E I S S V A A T L Q - - - S L G S G
Sb024600_Sorbi1    E K E G E L V V C K I F Y Q T Q P R Q C - - - - S W S S D R G T A A T A A M A A - - - - T T M A A Q E Q H R R D S G S G
 
AT5G56620.1     D V V S R - - - - - - - - - - - - - - - - - - V N M H P H T - - - - - - - - - - - - - R S F D E - - - - - G T A E A S K
Sb024600_Sorbi1    S C S S R D H E V S A T S F P A G Y T V T T A V E M Q Q H M K Q P A D H F S F A P F R K T F D Q E V G I G G D Q V P S N
 
AT5G56620.1     - - G R E N Q H V S G T C E E V H D G I I T S S M S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb024600_Sorbi1    Q L G R S E P H H A G Q G Q Q P H G P V L S T T T A V P A T A F L I S R P S N P V S T I V P P E M Q H A S V V L D H D Q
 
AT5G56620.1     - - - - - - - - H H M I H D - - - - H H N Q H - - H Q I G D R R - - - - - E F H M S S S Y P M T P T I T S Q H E S I F H
Sb024600_Sorbi1    F H V P A I L L H H - - H D K F Q P Q H Q Q H Q P Q Q K L D R R S A G L E E L I M G C T - - - S S T S T K G E T S I A H
 
AT5G56620.1     V T S T - - - M P F Q G S V V W F G I R R P N Y G L Y H S Y V Y R R R K F L T N L C I
Sb024600_Sorbi1    P Q E T E W P Y P Y - - - - - W - - - - P P D N Q D H H G - - - - - - - - - - - - - -
 
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