fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003892 not found in 480aa AT4G29230.1 not_not 0.400523560 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56620.1     MKNSKC------------NLIDSKLEEH-HHLCGSKHCPGCGRMIQAATKPNWVGLPAGV
Sb003892_Sorbi1 MDGAAAAAAATGSGGGGHRRMDSRIEEHGKYLSESSCCSQCGH--KTERKLDWVGLPAGV
                *..: .            . :**::*** ::*. *. *. **:  ::  * :********

AT5G56620.1     KFDPTDQELIEHLEAKVKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRD
Sb003892_Sorbi1 KFDPTDQELIEHLQAKVRAASAA---APSHPLIDEFIPTIEGEDGICYTHPERLPGLTKD
                *************:***:. .     :.************:**********::***:*:*

AT5G56620.1     GLSKHFFHKPSRAYTTGTRKRRKI----IQTDHDSELTGS-------SETRWHKTGKTRP
Sb003892_Sorbi1 GRSRHFFHRPSKAYTTGTRKRRKIQPRAAESSSSSALPAQQQQQQQRSETRWHKTGKTRP
                * *:****:**:************     ::. .* *...       *************

AT5G56620.1     VMINGQQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEEREGELVVSKIFYQTQP
Sb003892_Sorbi1 VVVAGQQRGCKKILVLYTNFGKHRKPDKTNWVMHQYHLGDKEEEREGELVVSKIFYQTQP
                *:: ******************:*:*:************ :*******************

AT5G56620.1     RQCVSNTNWSDHHGSKDVIGIGVGDEISSVAATLQSLGSGDVVSRVNMHP----------
Sb003892_Sorbi1 RQC------------------GVAAEPAVAAA-----ASSDTVEEAAADPPLPPDGMVVP
                ***                  **. * : .**     .*.*.*...  .*          

AT5G56620.1     ---------------------HTRSFDEGTAEAS----KGRENQHVSGTCEEVHDGIITS
Sb003892_Sorbi1 PPDVAGAFHGAAGIDEFNFAQFRSSFEEVDVGASSVQISVRDD-------EEVHAG----
                                     .  **:*  . **    . *::       **** *    

AT5G56620.1     SMSSHHMIHDHHNQH-HQIGDRRE----------FHMSS-SYPMTPTITSQHESIFHVTS
Sb003892_Sorbi1 ----HPNLHQEHNLHQHQFGNQEQRQRMAAAAAAFHINTPTEPITTMITS---------S
                    *  :*:.** * **:*::.:          **:.: : *:*. ***         *

AT5G56620.1     TMPFQGSVVWFGIRRPN-YGLYHSYVYRRRK-----------------------------
Sb003892_Sorbi1 TVVHHGSAV---LQHPDAYG--HGTTYRRHQQDDEQLHQQPQSFDGRSTAGLEAVIMGCT
                *: .:**.*   :::*: **  *. .***::                             

AT5G56620.1     --------------------FLTNLCI------------------------------
Sb003892_Sorbi1 SSRRSKRGKKLNLPYNIYSYFYVFFCIQEASGSGGNKESTGWPYQSFWPSDSQDHHG
                                    * . :**
BoxShade v3.31 C (beta, 970507) Output
AT5G56620.1     M K N S K C - - - - - - - - - - - - N L I D S K L E E H - H H L C G S K H C P G C G R M I Q A A T K P N W V G L P A G V
Sb003892_Sorbi1    M D G A A A A A A A T G S G G G G H R R M D S R I E E H G K Y L S E S S C C S Q C G H - - K T E R K L D W V G L P A G V
 
AT5G56620.1     K F D P T D Q E L I E H L E A K V K G K E E N K K W S S S H P L I D E F I P T I D G E D G I C Y T H P Q K L P G V T R D
Sb003892_Sorbi1    K F D P T D Q E L I E H L Q A K V R A A S A A - - - A P S H P L I D E F I P T I E G E D G I C Y T H P E R L P G L T K D
 
AT5G56620.1     G L S K H F F H K P S R A Y T T G T R K R R K I - - - - I Q T D H D S E L T G S - - - - - - - S E T R W H K T G K T R P
Sb003892_Sorbi1    G R S R H F F H R P S K A Y T T G T R K R R K I Q P R A A E S S S S S A L P A Q Q Q Q Q Q Q R S E T R W H K T G K T R P
 
AT5G56620.1     V M I N G Q Q R G C K K I L V L Y T N F G K N R R P E K T N W V M H Q Y H L G I N E E E R E G E L V V S K I F Y Q T Q P
Sb003892_Sorbi1    V V V A G Q Q R G C K K I L V L Y T N F G K H R K P D K T N W V M H Q Y H L G D K E E E R E G E L V V S K I F Y Q T Q P
 
AT5G56620.1     R Q C V S N T N W S D H H G S K D V I G I G V G D E I S S V A A T L Q S L G S G D V V S R V N M H P - - - - - - - - - -
Sb003892_Sorbi1    R Q C - - - - - - - - - - - - - - - - - - G V A A E P A V A A A - - - - - A S S D T V E E A A A D P P L P P D G M V V P
 
AT5G56620.1     - - - - - - - - - - - - - - - - - - - - - H T R S F D E G T A E A S - - - - K G R E N Q H V S G T C E E V H D G I I T S
Sb003892_Sorbi1    P P D V A G A F H G A A G I D E F N F A Q F R S S F E E V D V G A S S V Q I S V R D D - - - - - - - E E V H A G - - - -
 
AT5G56620.1     S M S S H H M I H D H H N Q H - H Q I G D R R E - - - - - - - - - - F H M S S - S Y P M T P T I T S Q H E S I F H V T S
Sb003892_Sorbi1    - - - - H P N L H Q E H N L H Q H Q F G N Q E Q R Q R M A A A A A A F H I N T P T E P I T T M I T S - - - - - - - - - S
 
AT5G56620.1     T M P F Q G S V V W F G I R R P N - Y G L Y H S Y V Y R R R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    T V V H H G S A V - - - L Q H P D A Y G - - H G T T Y R R H Q Q D D E Q L H Q Q P Q S F D G R S T A G L E A V I M G C T
 
AT5G56620.1     - - - - - - - - - - - - - - - - - - - - F L T N L C I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    S S R R S K R G K K L N L P Y N I Y S Y F Y V F F C I Q E A S G S G G N K E S T G W P Y Q S F W P S D S Q D H H G
 
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