fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024600 not found in 632aa AT4G29230.1 1st_not 0.443717277 II
Sb003892 not found in 480aa AT4G29230.1 not_not 0.400523560 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G56620.1     --------------------MKNSKC---------------------NLIDSKLEEH-HH
Sb003892_Sorbi1 --------------------MDGAAAAAAATGSG---------GGGHRRMDSRIEEHGKY
Sb024600_Sorbi1 LLLRLALRAARRRNKNHPSPITTTHACALPPGAAYEPDMNRGHSSSSKLINEKLEEH--R
                                    :  : .                     . ::.::***   

AT5G56620.1     LCGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHP
Sb003892_Sorbi1 LSESSCCSQCGH--KTERKLDWVGLPAGVKFDPTDQELIEHLQAKVRAASAA---APSHP
Sb024600_Sorbi1 ISTAKHCPHCGE--KIDSKPDWVGLPAGVKFDPTDQELIEHLEAKVKDEG-----SRSHP
                :. :. *. **.  :   * :*********************:***:        : ***

AT5G56620.1     LIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKI----IQT
Sb003892_Sorbi1 LIDEFIPTIEGEDGICYTHPERLPGLTKDGRSRHFFHRPSKAYTTGTRKRRKIQPRAAES
Sb024600_Sorbi1 LIDEFIPTIDGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQ---TEC
                *********:**********::***:*:** *:****:**:************     : 

AT5G56620.1     DHDSELTGS-------SETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPEKTNW
Sb003892_Sorbi1 SSSSALPAQQQQQQQRSETRWHKTGKTRPVVVAGQQRGCKKILVLYTNFGKHRKPDKTNW
Sb024600_Sorbi1 D------------VHKGETRWHKTGKTRPVMVNGRQKGCKKILVLYTNFGKHRKPEKTNW
                .               .*************:: *:*:**************:*:*:****

AT5G56620.1     VMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNWSDHHGSKDVIGIGVGDEISSVA
Sb003892_Sorbi1 VMHQYHLGDKEEEREGELVVSKIFYQTQPRQC------------------GVAAEPAVAA
Sb024600_Sorbi1 VMHQYHLGDLEEEKEGELVVCKIFYQTQPRQC----SWSSDR--------GTAATAAMAA
                ********  ***:******.***********                  *..   : .*

AT5G56620.1     ATLQ------------SLGSGDVVSRVNMHP-----------------------------
Sb003892_Sorbi1 A-----------------ASSDTVEEAAADPPLPPDGMVVPPPDVAGAFHGAAGIDEFNF
Sb024600_Sorbi1 TTMAAQEQHRRDSGSGSCSSRDHEVSATSFP----AGYTVTTA-VEMQQHMKQPADHFSF
                :                 .* *    .   *                             

AT5G56620.1     --HTRSFD-EGTAEAS-------KGRENQHVSGTCEEVHDGIITSSMSSHHMIHDHHNQH
Sb003892_Sorbi1 AQFRSSFE-EVDVGASSV---QISVRDD-------EEVHAG--------HPNLHQEHNLH
Sb024600_Sorbi1 APFRKTFDQEVGIGGDQVPSNQ-LGRSEPHHAGQGQQPHGPVLSTT--------------
                  .  :*: *    ..         *.:       :: *                     

AT5G56620.1     -HQIGDRRE----------FHMSS-SYPMTPTITSQ--HESI------FHVTSTMPFQGS
Sb003892_Sorbi1 QHQFGNQEQRQRMAAAAAAFHINTPTEPITTMITS-----------------STVVHHGS
Sb024600_Sorbi1 ------------TAVPATAFLISRPSNPVSTIVPPEMQHASVVLDHDQFHVPAILLHH--
                                   * :.  : *::. :..                 : : .:  

AT5G56620.1     VVWFGIRRPN-YGLYHSYVYRRRK------------------------------------
Sb003892_Sorbi1 AV---LQHPDAYG--HGTTYRRHQQDDEQLHQQPQSFDGRSTAGLEAVIMGCTSSRRSKR
Sb024600_Sorbi1 ---------------HDKFQPQHQQ-----HQPQQKLDRRS-AGLEELIMGCTSSTSTKG
                               *.    :::                                    

AT5G56620.1     -------------FLTNLCI------------------------------
Sb003892_Sorbi1 GKKLNLPYNIYSYFYVFFCIQEASGSGGNKESTGWPYQSFWPSDSQDHHG
Sb024600_Sorbi1 ETSIAHP-----------------------QETEWPY-PYWPPDNQDHHG
BoxShade v3.31 C (beta, 970507) Output
AT5G56620.1     - - - - - - - - - - - - - - - - - - - - M K N S K C - - - - - - - - - - - - - - - - - - - - - N L I D S K L E E H - H H
Sb003892_Sorbi1    - - - - - - - - - - - - - - - - - - - - M D G A A A A A A A T G S G - - - - - - - - - G G G H R R M D S R I E E H G K Y
Sb024600_Sorbi1    L L L R L A L R A A R R R N K N H P S P I T T T H A C A L P P G A A Y E P D M N R G H S S S S K L I N E K L E E H - - R
 
AT5G56620.1     L C G S K H C P G C G R M I Q A A T K P N W V G L P A G V K F D P T D Q E L I E H L E A K V K G K E E N K K W S S S H P
Sb003892_Sorbi1    L S E S S C C S Q C G H - - K T E R K L D W V G L P A G V K F D P T D Q E L I E H L Q A K V R A A S A A - - - A P S H P
Sb024600_Sorbi1    I S T A K H C P H C G E - - K I D S K P D W V G L P A G V K F D P T D Q E L I E H L E A K V K D E G - - - - - S R S H P
 
AT5G56620.1     L I D E F I P T I D G E D G I C Y T H P Q K L P G V T R D G L S K H F F H K P S R A Y T T G T R K R R K I - - - - I Q T
Sb003892_Sorbi1    L I D E F I P T I E G E D G I C Y T H P E R L P G L T K D G R S R H F F H R P S K A Y T T G T R K R R K I Q P R A A E S
Sb024600_Sorbi1    L I D E F I P T I D G E D G I C Y T H P E K L P G V T R D G L S K H F F H R P S K A Y T T G T R K R R K I Q - - - T E C
 
AT5G56620.1     D H D S E L T G S - - - - - - - S E T R W H K T G K T R P V M I N G Q Q R G C K K I L V L Y T N F G K N R R P E K T N W
Sb003892_Sorbi1    S S S S A L P A Q Q Q Q Q Q Q R S E T R W H K T G K T R P V V V A G Q Q R G C K K I L V L Y T N F G K H R K P D K T N W
Sb024600_Sorbi1    D - - - - - - - - - - - - V H K G E T R W H K T G K T R P V M V N G R Q K G C K K I L V L Y T N F G K H R K P E K T N W
 
AT5G56620.1     V M H Q Y H L G I N E E E R E G E L V V S K I F Y Q T Q P R Q C V S N T N W S D H H G S K D V I G I G V G D E I S S V A
Sb003892_Sorbi1    V M H Q Y H L G D K E E E R E G E L V V S K I F Y Q T Q P R Q C - - - - - - - - - - - - - - - - - - G V A A E P A V A A
Sb024600_Sorbi1    V M H Q Y H L G D L E E E K E G E L V V C K I F Y Q T Q P R Q C - - - - S W S S D R - - - - - - - - G T A A T A A M A A
 
AT5G56620.1     A T L Q - - - - - - - - - - - - S L G S G D V V S R V N M H P - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    A - - - - - - - - - - - - - - - - - A S S D T V E E A A A D P P L P P D G M V V P P P D V A G A F H G A A G I D E F N F
Sb024600_Sorbi1    T T M A A Q E Q H R R D S G S G S C S S R D H E V S A T S F P - - - - A G Y T V T T A - V E M Q Q H M K Q P A D H F S F
 
AT5G56620.1     - - H T R S F D - E G T A E A S - - - - - - - K G R E N Q H V S G T C E E V H D G I I T S S M S S H H M I H D H H N Q H
Sb003892_Sorbi1    A Q F R S S F E - E V D V G A S S V - - - Q I S V R D D - - - - - - - E E V H A G - - - - - - - - H P N L H Q E H N L H
Sb024600_Sorbi1    A P F R K T F D Q E V G I G G D Q V P S N Q - L G R S E P H H A G Q G Q Q P H G P V L S T T - - - - - - - - - - - - - -
 
AT5G56620.1     - H Q I G D R R E - - - - - - - - - - F H M S S - S Y P M T P T I T S Q - - H E S I - - - - - - F H V T S T M P F Q G S
Sb003892_Sorbi1    Q H Q F G N Q E Q R Q R M A A A A A A F H I N T P T E P I T T M I T S - - - - - - - - - - - - - - - - - S T V V H H G S
Sb024600_Sorbi1    - - - - - - - - - - - - T A V P A T A F L I S R P S N P V S T I V P P E M Q H A S V V L D H D Q F H V P A I L L H H - -
 
AT5G56620.1     V V W F G I R R P N - Y G L Y H S Y V Y R R R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    A V - - - L Q H P D A Y G - - H G T T Y R R H Q Q D D E Q L H Q Q P Q S F D G R S T A G L E A V I M G C T S S R R S K R
Sb024600_Sorbi1    - - - - - - - - - - - - - - - H D K F Q P Q H Q Q - - - - - H Q P Q Q K L D R R S - A G L E E L I M G C T S S T S T K G
 
AT5G56620.1     - - - - - - - - - - - - - F L T N L C I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    G K K L N L P Y N I Y S Y F Y V F F C I Q E A S G S G G N K E S T G W P Y Q S F W P S D S Q D H H G
Sb024600_Sorbi1    E T S I A H P - - - - - - - - - - - - - - - - - - - - - - - Q E T E W P Y - P Y W P P D N Q D H H G
 
0