fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000198 not found in 451aa AT4G29230.1 1st_not 0.481675392 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56620.1     ---MKN----SKCNLIDSKLEEHHHLCGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPTD
gm000198_Glyma0 MSKISNLSSVSSSDLIDAKLEE-HQLCGSKQCPGCGHKFEG--KPDWLGLPAGVKFDPTD
                   :.*    *..:***:**** *:*****:*****: ::.  **:*:************

AT5G56620.1     QELIEHLEAKVKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHF
gm000198_Glyma0 QELIEHLEAKVEAK--NMK---SHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHF
                ***********:.*  * *   ************:**********:***********:**

AT5G56620.1     FHKPSRAYTTGTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMINGQQRGCKKILVLY
gm000198_Glyma0 FHRPSKAYTTGTRKRRKI---QNECDLQG-GETRWHKTGKTRPVMVNGKQKGCKKILVLY
                **:**:************   :::.:* * .**************:**:*:*********

AT5G56620.1     TNFGKNRRPEKTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNWSDHHGSKD
gm000198_Glyma0 TNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQC----NWSDRSATT-
                *******:************** :***:******************    ****: .:. 

AT5G56620.1     VIGIGVG------------------------DEISSVAATLQSLGSGDVVSRVNMH----
gm000198_Glyma0 --GEGSGEPNNSGRRDSGSGSCSSKEIVTHRDEMSAV------VGVPPMTSFTHHHPLDI
                  * * *                        **:*:*      :*   :.* .: *    

AT5G56620.1     -----------PHTRSFDE----GTAEASKGRENQHVSGTCEEVHDGIITSSMSSHHMIH
gm000198_Glyma0 QQLKPDHFSFIPFRKSFDERMQVGIGEASTAREVMQASGSCEEVHERHLAQVTPHHHQLQ
                           *. :****    * .***..**  :.**:*****:  ::.  . ** ::

AT5G56620.1     DHHNQHHQIGDRREFHMSS-SYPMTPTITS---QHESI------FHVTSTMPFQGSVVWF
gm000198_Glyma0 -QHAHHHQISN-SAFHISRPSHPISTIISPPPLHHTSIILDDNSYHVSRIM---------
                 :* :****.:   **:*  *:*::. *:.   :* **      :**:  *         

AT5G56620.1     GIRRPNY----GLYHSYVYRRRKFLTNLCI------------------------------
gm000198_Glyma0 -LQNENFQQQQQQHHKLGGRSASGLEELIMGCTSTEIKEESSITNAQEAEWLKYSSYWPD
                 ::. *:      :*.   *  . * :* :                              

AT5G56620.1     --------
gm000198_Glyma0 PDNQDHHG
BoxShade v3.31 C (beta, 970507) Output
AT5G56620.1     - - - M K N - - - - S K C N L I D S K L E E H H H L C G S K H C P G C G R M I Q A A T K P N W V G L P A G V K F D P T D
gm000198_Glyma0    M S K I S N L S S V S S S D L I D A K L E E - H Q L C G S K Q C P G C G H K F E G - - K P D W L G L P A G V K F D P T D
 
AT5G56620.1     Q E L I E H L E A K V K G K E E N K K W S S S H P L I D E F I P T I D G E D G I C Y T H P Q K L P G V T R D G L S K H F
gm000198_Glyma0    Q E L I E H L E A K V E A K - - N M K - - - S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T R D G L S R H F
 
AT5G56620.1     F H K P S R A Y T T G T R K R R K I I Q T D H D S E L T G S S E T R W H K T G K T R P V M I N G Q Q R G C K K I L V L Y
gm000198_Glyma0    F H R P S K A Y T T G T R K R R K I - - - Q N E C D L Q G - G E T R W H K T G K T R P V M V N G K Q K G C K K I L V L Y
 
AT5G56620.1     T N F G K N R R P E K T N W V M H Q Y H L G I N E E E R E G E L V V S K I F Y Q T Q P R Q C V S N T N W S D H H G S K D
gm000198_Glyma0    T N F G K N R K P E K T N W V M H Q Y H L G Q H E E E K E G E L V V S K I F Y Q T Q P R Q C - - - - N W S D R S A T T -
 
AT5G56620.1     V I G I G V G - - - - - - - - - - - - - - - - - - - - - - - - D E I S S V A A T L Q S L G S G D V V S R V N M H - - - -
gm000198_Glyma0    - - G E G S G E P N N S G R R D S G S G S C S S K E I V T H R D E M S A V - - - - - - V G V P P M T S F T H H H P L D I
 
AT5G56620.1     - - - - - - - - - - - P H T R S F D E - - - - G T A E A S K G R E N Q H V S G T C E E V H D G I I T S S M S S H H M I H
gm000198_Glyma0    Q Q L K P D H F S F I P F R K S F D E R M Q V G I G E A S T A R E V M Q A S G S C E E V H E R H L A Q V T P H H H Q L Q
 
AT5G56620.1     D H H N Q H H Q I G D R R E F H M S S - S Y P M T P T I T S - - - Q H E S I - - - - - - F H V T S T M P F Q G S V V W F
gm000198_Glyma0    - Q H A H H H Q I S N - S A F H I S R P S H P I S T I I S P P P L H H T S I I L D D N S Y H V S R I M - - - - - - - - -
 
AT5G56620.1     G I R R P N Y - - - - G L Y H S Y V Y R R R K F L T N L C I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm000198_Glyma0    - L Q N E N F Q Q Q Q Q Q H H K L G G R S A S G L E E L I M G C T S T E I K E E S S I T N A Q E A E W L K Y S S Y W P D
 
AT5G56620.1     - - - - - - - -
gm000198_Glyma0    P D N Q D H H G
 
0