fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005781 not found in 395aa AT5G56960.1 1st_1st 0.269387755 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56960.1     -----MMHLILSCSYLISMDGYYNEASEE------PSSSSSSGSLARSLFHEYRQSVIPL
pt005781_POPTR_ MDSPEISSLIFT----IPSSSHMPEAHREAPSLLPPILPSTSSPLQHTL--QLLQPVLPT
                     :  **::    *. ..:  ** .*      *  .*:*..* ::*  :  *.*:* 

AT5G56960.1     QNGHVPSMAFMNNLPYVEIRPQESQRLAFNDTQRLFYQMKIEASLREWFPEDFNRKSSPA
pt005781_POPTR_ PTGNI--------------------------LQQVLQSLQQEPS----------------
                 .*::                           *::: .:: *.*                

AT5G56960.1     NSDYLRPPHYPSSSSSSLSPNNISEYSSLLFPLIPKPSTTTEAVNVPVLPPLAPINMIHP
pt005781_POPTR_ -------PQQQAIQSSQSTPSTTSLLQEAMQPLQAIQSSTS------------------P
                       *:  : .**. :*.. *  .. : ** .  *:*:                  *

AT5G56960.1     QHQE----PLFRNRQ-----REEEAMTQAILAVLTGPSSPPSTSSSPQ--------RKGR
pt005781_POPTR_ HQQALQAFALERNIQLPTPESEDAVMTRAILAVLTFPS--PSSSSSSHSLPHMHRVRQG-
                ::*     .* ** *      *: .**:******* **  **:***.:        *:* 

AT5G56960.1     ATAFKRYYSMISDR--GRAPLPSVRKQSMMTRAMSFYNRLNINQRERFTRENATTHGEGS
pt005781_POPTR_ ASAFNNYRSALAPKTQTRA---SLHRHSMLTRVITYYRRLNIERREHML-----------
                *:**:.* * :: :   **   *::::**:**.:::*.****::**::            

AT5G56960.1     GGSGGGGRYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQ
pt005781_POPTR_ -----GGR----PSSTQLHHMISERKRREKINESFKALRSILPPEAKKDKASILTRTREY
                     ***    **:***:***********:****:****:*** :******:*: :** 

AT5G56960.1     LSSLQGEISKLLERNREVEAKLAGEREIENDLRPE--ERFNVRIRHIPESTSRERTLDLR
pt005781_POPTR_ LTSLKAQVEELTRKNQKLEAQLS--KAAVSQVRDSSYERLDVRVTHISESTSEQRIIDLV
                *:**:.::.:* .:*:::**:*:  :   .::* .  **::**: **.****.:* :** 

AT5G56960.1     VVLRGDIIRVDDLMIRLLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRLKIEG-E
pt005781_POPTR_ VNLRGESPILDTVITRILEFLRQVTDVSLISIEAST--HTAESTSFNRVI-LRLNIEGTD
                * ***:   :* :: *:****:*:.:***:**** *  ::  .**:  ** ***:*** :

AT5G56960.1     WDESAFQEAVRRVVADLAH
pt005781_POPTR_ WDESGFQEAVKRVVEDLAR
                ****.*****:*** ***:
BoxShade v3.31 C (beta, 970507) Output
AT5G56960.1     - - - - - M M H L I L S C S Y L I S M D G Y Y N E A S E E - - - - - - P S S S S S S G S L A R S L F H E Y R Q S V I P L
pt005781_POPTR_    M D S P E I S S L I F T - - - - I P S S S H M P E A H R E A P S L L P P I L P S T S S P L Q H T L - - Q L L Q P V L P T
 
AT5G56960.1     Q N G H V P S M A F M N N L P Y V E I R P Q E S Q R L A F N D T Q R L F Y Q M K I E A S L R E W F P E D F N R K S S P A
pt005781_POPTR_    P T G N I - - - - - - - - - - - - - - - - - - - - - - - - - - L Q Q V L Q S L Q Q E P S - - - - - - - - - - - - - - - -
 
AT5G56960.1     N S D Y L R P P H Y P S S S S S S L S P N N I S E Y S S L L F P L I P K P S T T T E A V N V P V L P P L A P I N M I H P
pt005781_POPTR_    - - - - - - - P Q Q Q A I Q S S Q S T P S T T S L L Q E A M Q P L Q A I Q S S T S - - - - - - - - - - - - - - - - - - P
 
AT5G56960.1     Q H Q E - - - - P L F R N R Q - - - - - R E E E A M T Q A I L A V L T G P S S P P S T S S S P Q - - - - - - - - R K G R
pt005781_POPTR_    H Q Q A L Q A F A L E R N I Q L P T P E S E D A V M T R A I L A V L T F P S - - P S S S S S S H S L P H M H R V R Q G -
 
AT5G56960.1     A T A F K R Y Y S M I S D R - - G R A P L P S V R K Q S M M T R A M S F Y N R L N I N Q R E R F T R E N A T T H G E G S
pt005781_POPTR_    A S A F N N Y R S A L A P K T Q T R A - - - S L H R H S M L T R V I T Y Y R R L N I E R R E H M L - - - - - - - - - - -
 
AT5G56960.1     G G S G G G G R Y T S G P S A T Q L Q H M I S E R K R R E K L N E S F Q A L R S L L P P G T K K D K A S V L S I A R E Q
pt005781_POPTR_    - - - - - G G R - - - - P S S T Q L H H M I S E R K R R E K I N E S F K A L R S I L P P E A K K D K A S I L T R T R E Y
 
AT5G56960.1     L S S L Q G E I S K L L E R N R E V E A K L A G E R E I E N D L R P E - - E R F N V R I R H I P E S T S R E R T L D L R
pt005781_POPTR_    L T S L K A Q V E E L T R K N Q K L E A Q L S - - K A A V S Q V R D S S Y E R L D V R V T H I S E S T S E Q R I I D L V
 
AT5G56960.1     V V L R G D I I R V D D L M I R L L E F L K Q I N N V S L V S I E A R T L A R A E G D T S I V L V I S L R L K I E G - E
pt005781_POPTR_    V N L R G E S P I L D T V I T R I L E F L R Q V T D V S L I S I E A S T - - H T A E S T S F N R V I - L R L N I E G T D
 
AT5G56960.1     W D E S A F Q E A V R R V V A D L A H
pt005781_POPTR_    W D E S G F Q E A V K R V V E D L A R
 
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