fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003923 not found in 540aa AT5G56960.1 1st_1st 0.176870748 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56960.1     -----------------MMHLILS-------------------CSYLISMDGYYNEASEE
Sb003923_Sorbi1 MTSAAASKDERDTRAVLLMDAIFSLAAGPRARVLERAAARIPGCLY-ICLWAPMIAAGLP
                                 :*. *:*                   * * *.: .    *.  

AT5G56960.1     PSSSSSSGSLARSLFHEYRQSVIPLQNGHVPSMAFMNNLPYVEIRPQESQRLAFNDTQRL
Sb003923_Sorbi1 PSRFSPMDCLA-PLFSDGGERV----RSCVPGWAYKDRRPYMELSEPDLTSSASLPEQLQ
                **  *. ..** .** :  : *    .. **. *: :. **:*:   :    *    *  

AT5G56960.1     FYQM--------------KIEASLREWFPEDFNRKSSPANSDYLR----------PPHYP
Sb003923_Sorbi1 FYHEAGTKMAVFMGCDNGEIEVGLS-------STSAPPAVASHVQQSLLEELMQAAPTVP
                **:               :**..*        . .:.** :.:::          .*  *

AT5G56960.1     SSSSSSLSPNNIS--EYSSLLFPL---------IPKPSTTTEAVNVPVLPPL------AP
Sb003923_Sorbi1 SSSSSSMPSVSIGSPEYSSFIRSMATSAAAATSAAEPSSSQQLQQHPVGPPLPGPGLPAP
                ******:.. .*.  ****:: .:          .:**:: :  : ** ***      **

AT5G56960.1     INMIHPQHQEPLFRNRQREEEA-MTQAILAVLTGPSSPPSTSSSPQRKGRATAFKRYYSM
Sb003923_Sorbi1 PPVYGP-HGQASFLDPDNEVAAIMTQAILAVISSSAPPPPASIAVPWRG---AFRAYNAA
                  :  * * :. * : :.*  * ********::..:.**.:* :   :*   **: * : 

AT5G56960.1     ISDRGRAPLPSVRKQSMMTRAMSFYNRLNINQRERFTRENATTHGEGSGGSG-----GGG
Sb003923_Sorbi1 LSPRAR-PKPGAPGQRMIKTAIALMVKVQMAMRRRELAE-ARQHEDATAAAAQPPPPTQQ
                :* *.* * *..  * *:. *:::  ::::  *.*   * *  * :.:..:.        

AT5G56960.1     RYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGE
Sb003923_Sorbi1 KHTS----SQLHHMFSERRRRERLNESFQTLRALLPPGTKKDKATVLANTTEYMNKLIAE
                ::**    :**:**:***:***:******:**:***********:**: : * :..* .*

AT5G56960.1     ISKLLERNREVEAKL------AGEREIENDLRPEERFNVRIR---HIPESTSRE--RTLD
Sb003923_Sorbi1 VSELEERNRRLEAQLGLLLPGGDTRQTPSDDDPSERVAVDVTTGASTSSSSSRQPHQEVS
                :*:* ****.:**:*      .. *:  .*  *.**. * :      ..*:**:  : :.

AT5G56960.1     LRVVLRGDIIRVDDLMIRLLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRLKIEG
Sb003923_Sorbi1 IRVTVRTE-CDLSEVVVAMIARIKEMGRFTVVTVDARQRSSAHVQVGII------LRATG
                :**.:* :   :.:::: ::  :*::...::*:::**  : *. :..*:      *:  *

AT5G56960.1     ---EWDESAFQEAVRRVVADLAH-------
Sb003923_Sorbi1 GNDELDETSLKEAVAKAVEDAVARPPSPPP
                   * **::::*** :.* * .
BoxShade v3.31 C (beta, 970507) Output
AT5G56960.1     - - - - - - - - - - - - - - - - - M M H L I L S - - - - - - - - - - - - - - - - - - - C S Y L I S M D G Y Y N E A S E E
Sb003923_Sorbi1    M T S A A A S K D E R D T R A V L L M D A I F S L A A G P R A R V L E R A A A R I P G C L Y - I C L W A P M I A A G L P
 
AT5G56960.1     P S S S S S S G S L A R S L F H E Y R Q S V I P L Q N G H V P S M A F M N N L P Y V E I R P Q E S Q R L A F N D T Q R L
Sb003923_Sorbi1    P S R F S P M D C L A - P L F S D G G E R V - - - - R S C V P G W A Y K D R R P Y M E L S E P D L T S S A S L P E Q L Q
 
AT5G56960.1     F Y Q M - - - - - - - - - - - - - - K I E A S L R E W F P E D F N R K S S P A N S D Y L R - - - - - - - - - - P P H Y P
Sb003923_Sorbi1    F Y H E A G T K M A V F M G C D N G E I E V G L S - - - - - - - S T S A P P A V A S H V Q Q S L L E E L M Q A A P T V P
 
AT5G56960.1     S S S S S S L S P N N I S - - E Y S S L L F P L - - - - - - - - - I P K P S T T T E A V N V P V L P P L - - - - - - A P
Sb003923_Sorbi1    S S S S S S M P S V S I G S P E Y S S F I R S M A T S A A A A T S A A E P S S S Q Q L Q Q H P V G P P L P G P G L P A P
 
AT5G56960.1     I N M I H P Q H Q E P L F R N R Q R E E E A - M T Q A I L A V L T G P S S P P S T S S S P Q R K G R A T A F K R Y Y S M
Sb003923_Sorbi1    P P V Y G P - H G Q A S F L D P D N E V A A I M T Q A I L A V I S S S A P P P P A S I A V P W R G - - - A F R A Y N A A
 
AT5G56960.1     I S D R G R A P L P S V R K Q S M M T R A M S F Y N R L N I N Q R E R F T R E N A T T H G E G S G G S G - - - - - G G G
Sb003923_Sorbi1    L S P R A R - P K P G A P G Q R M I K T A I A L M V K V Q M A M R R R E L A E - A R Q H E D A T A A A A Q P P P P T Q Q
 
AT5G56960.1     R Y T S G P S A T Q L Q H M I S E R K R R E K L N E S F Q A L R S L L P P G T K K D K A S V L S I A R E Q L S S L Q G E
Sb003923_Sorbi1    K H T S - - - - S Q L H H M F S E R R R R E R L N E S F Q T L R A L L P P G T K K D K A T V L A N T T E Y M N K L I A E
 
AT5G56960.1     I S K L L E R N R E V E A K L - - - - - - A G E R E I E N D L R P E E R F N V R I R - - - H I P E S T S R E - - R T L D
Sb003923_Sorbi1    V S E L E E R N R R L E A Q L G L L L P G G D T R Q T P S D D D P S E R V A V D V T T G A S T S S S S S R Q P H Q E V S
 
AT5G56960.1     L R V V L R G D I I R V D D L M I R L L E F L K Q I N N V S L V S I E A R T L A R A E G D T S I V L V I S L R L K I E G
Sb003923_Sorbi1    I R V T V R T E - C D L S E V V V A M I A R I K E M G R F T V V T V D A R Q R S S A H V Q V G I I - - - - - - L R A T G
 
AT5G56960.1     - - - E W D E S A F Q E A V R R V V A D L A H - - - - - - -
Sb003923_Sorbi1    G N D E L D E T S L K E A V A K A V E D A V A R P P S P P P
 
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