fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042459 not found in 483aa AT5G56960.1 1st_1st 0.291156462 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56960.1     MMHLI---------------------LSCSYL-------IS------MDGYYNEASEEPS
gm042459_Glyma1 -MHPMESVFSLSVAARTDFIQFLVQSLGCSYICLWAYDSISPNRLSFLDGIYNVRNNQ--
                 ** :                     *.***:       **      :** **  .::  

AT5G56960.1     SSSSSGSL-ARSLFHEYRQSVIPLQNGHVPSMAFMNNLPYVEIRPQESQRLAFNDTQRLF
gm042459_Glyma1 ASSSLGSVQAQQLFSQFRTLTFDVNDDRVPGLAFRNQRPYLELQQLELLRLASTEIQIQF
                :*** **: *:.** ::*  .: :::.:**.:** *: **:*::  *  *** .: *  *

AT5G56960.1     Y--------------------------QMKIEASLREWFPEDFNRKSSPANSDYLRPPHY
gm042459_Glyma1 FQEARIKTAVFMGCNKGEIELGFLNMSQVDIQTALRSLFPEDFSTRVQSQQID--QNP--
                :                          *:.*:::**. *****. : .. : *  : *  

AT5G56960.1     PSSSSSSL------SPNNISEYSSLLFPLIPKPSTTTEAVNVPVLPPLAPINMIH--PQH
gm042459_Glyma1 PTSSSSSLRSISTGSP----EYSSLIF------KTEHDAIMRAILHVISPTTSYHHEQQH
                *:******      **    *****:*      .*  :*:  .:*  ::* .  *   **

AT5G56960.1     QEPLFRNRQREEEAMTQAILAVLTGPSSPPSTSSSPQRKGRATAFKRYYSMISDRGRAPL
gm042459_Glyma1 HQNL------------------------PYSNNFLPVVRPDASAFQRYR---QDLGSNMA
                :: *                        * *..  *  :  *:**:**    .* *    

AT5G56960.1     PSVRKQSMMTRAMSFYNRLN-INQRERFTRENATTHGEGSGGSGGGGRYTSGPSATQLQH
gm042459_Glyma1 SNFRRQSLMKRSLVFFRNMNFMRMRERV-------------------QATSRPTNTQLHH
                ...*:**:*.*:: *:..:* :. ***.                   : ** *: ***:*

AT5G56960.1     MISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREVEA
gm042459_Glyma1 MISERRRREKLNENFQALRALLPPGTKKDKASILIAAKETLRSLMAEVDKLSNRNQGLTS
                *****:*******.*****:************:*  *:* * ** .*:.** :**: : :

AT5G56960.1     KLAGEREIEND-----LRPEERFNVRIRHIPE-STSRERTLDLRVVLRGDIIRVDDLMIR
gm042459_Glyma1 LLPAKESTAEETKVASLSPNERLSVRISHVPESSTSEERMVELQVNVRGQVSQT-DLLIR
                 *..:..  ::     * *:**:.*** *:** ***.** ::*:* :**:: :. **:**

AT5G56960.1     LLEFLKQINNVSLVSIEARTLARAEGDTSI-VLVISLRLKIEGEWDESAFQEAVRRVVAD
gm042459_Glyma1 LLKFLKLAHHVSLVSMDANTHI-AEGNNALHQLTFRLRIIQGSEWDESAFEEAVRRVVAD
                **:***  ::*****::*.*   ***:.::  *.: **:   .*******:*********

AT5G56960.1     LAH-----
gm042459_Glyma1 LAQYQMDQ
                **:
BoxShade v3.31 C (beta, 970507) Output
AT5G56960.1     M M H L I - - - - - - - - - - - - - - - - - - - - - L S C S Y L - - - - - - - I S - - - - - - M D G Y Y N E A S E E P S
gm042459_Glyma1    - M H P M E S V F S L S V A A R T D F I Q F L V Q S L G C S Y I C L W A Y D S I S P N R L S F L D G I Y N V R N N Q - -
 
AT5G56960.1     S S S S S G S L - A R S L F H E Y R Q S V I P L Q N G H V P S M A F M N N L P Y V E I R P Q E S Q R L A F N D T Q R L F
gm042459_Glyma1    A S S S L G S V Q A Q Q L F S Q F R T L T F D V N D D R V P G L A F R N Q R P Y L E L Q Q L E L L R L A S T E I Q I Q F
 
AT5G56960.1     Y - - - - - - - - - - - - - - - - - - - - - - - - - - Q M K I E A S L R E W F P E D F N R K S S P A N S D Y L R P P H Y
gm042459_Glyma1    F Q E A R I K T A V F M G C N K G E I E L G F L N M S Q V D I Q T A L R S L F P E D F S T R V Q S Q Q I D - - Q N P - -
 
AT5G56960.1     P S S S S S S L - - - - - - S P N N I S E Y S S L L F P L I P K P S T T T E A V N V P V L P P L A P I N M I H - - P Q H
gm042459_Glyma1    P T S S S S S L R S I S T G S P - - - - E Y S S L I F - - - - - - K T E H D A I M R A I L H V I S P T T S Y H H E Q Q H
 
AT5G56960.1     Q E P L F R N R Q R E E E A M T Q A I L A V L T G P S S P P S T S S S P Q R K G R A T A F K R Y Y S M I S D R G R A P L
gm042459_Glyma1    H Q N L - - - - - - - - - - - - - - - - - - - - - - - - P Y S N N F L P V V R P D A S A F Q R Y R - - - Q D L G S N M A
 
AT5G56960.1     P S V R K Q S M M T R A M S F Y N R L N - I N Q R E R F T R E N A T T H G E G S G G S G G G G R Y T S G P S A T Q L Q H
gm042459_Glyma1    S N F R R Q S L M K R S L V F F R N M N F M R M R E R V - - - - - - - - - - - - - - - - - - - Q A T S R P T N T Q L H H
 
AT5G56960.1     M I S E R K R R E K L N E S F Q A L R S L L P P G T K K D K A S V L S I A R E Q L S S L Q G E I S K L L E R N R E V E A
gm042459_Glyma1    M I S E R R R R E K L N E N F Q A L R A L L P P G T K K D K A S I L I A A K E T L R S L M A E V D K L S N R N Q G L T S
 
AT5G56960.1     K L A G E R E I E N D - - - - - L R P E E R F N V R I R H I P E - S T S R E R T L D L R V V L R G D I I R V D D L M I R
gm042459_Glyma1    L L P A K E S T A E E T K V A S L S P N E R L S V R I S H V P E S S T S E E R M V E L Q V N V R G Q V S Q T - D L L I R
 
AT5G56960.1     L L E F L K Q I N N V S L V S I E A R T L A R A E G D T S I - V L V I S L R L K I E G E W D E S A F Q E A V R R V V A D
gm042459_Glyma1    L L K F L K L A H H V S L V S M D A N T H I - A E G N N A L H Q L T F R L R I I Q G S E W D E S A F E E A V R R V V A D
 
AT5G56960.1     L A H - - - - -
gm042459_Glyma1    L A Q Y Q M D Q
 
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