fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G57150.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042416 not found in 225aa AT5G57150.2 not_not 0.480725623 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G57150.1     MEDIVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIVSER
gm042416_Glyma1 MENI-GEEYKHYWETNMFLQTQ--ELGSWGLDEALSGYYDSSSPDGAASSAASKNIVSER
                **:* .:* .:***.. ***.:  * .** *:**:** ************.*********

AT5G57150.1     NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELES-TPKS
gm042416_Glyma1 NRRKKLNERLFALRSVVPNISKMDKASIIKDAIDYIQHLHEQEKIIQAEIMELESGMPKK
                ***:***:************:************.**: *: :** ::*** ****  **.

AT5G57150.1     SLSFSKDFDRDLLVPVTSKKMKQLDS-----GSSTSLIEVLELKVTFMGERTMVVSVTCN
gm042416_Glyma1 SPSY--DFEQELLPVVLRSKKKRTEQLYDCVTSRNSPIEVLELRVTHMGEKIVVVSLTCS
                * *:  **:::**  *  .* *: :.      * .* ******:**.***: :***:**.

AT5G57150.1     KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYN
gm042416_Glyma1 KRTDTMVKLCEVFESLKLKIITANITSFSDRLLKIVFIE----------------VSLLT
                ****************:***:*:*:****. ::: ****                :.  .

AT5G57150.1     ETQSPTLSIDSLY
gm042416_Glyma1 CSSFPS-------
                 :. *:
BoxShade v3.31 C (beta, 970507) Output
AT5G57150.1     M E D I V D Q E L S N Y W E P S S F L Q N E D F E Y D S W P L E E A I S G S Y D S S S P D G A A S S P A S K N I V S E R
gm042416_Glyma1    M E N I - G E E Y K H Y W E T N M F L Q T Q - - E L G S W G L D E A L S G Y Y D S S S P D G A A S S A A S K N I V S E R
 
AT5G57150.1     N R R Q K L N Q R L F A L R S V V P N I T K M D K A S I I K D A I S Y I E G L Q Y E E K K L E A E I R E L E S - T P K S
gm042416_Glyma1    N R R K K L N E R L F A L R S V V P N I S K M D K A S I I K D A I D Y I Q H L H E Q E K I I Q A E I M E L E S G M P K K
 
AT5G57150.1     S L S F S K D F D R D L L V P V T S K K M K Q L D S - - - - - G S S T S L I E V L E L K V T F M G E R T M V V S V T C N
gm042416_Glyma1    S P S Y - - D F E Q E L L P V V L R S K K K R T E Q L Y D C V T S R N S P I E V L E L R V T H M G E K I V V V S L T C S
 
AT5G57150.1     K R T D T M V K L C E V F E S L N L K I L T S N L T S F S G M I F H T V F I E A D E E E Q E V L R L K I E T G I G A Y N
gm042416_Glyma1    K R T D T M V K L C E V F E S L K L K I I T A N I T S F S D R L L K I V F I E - - - - - - - - - - - - - - - - V S L L T
 
AT5G57150.1     E T Q S P T L S I D S L Y
gm042416_Glyma1    C S S F P S - - - - - - -
 
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