fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G57150.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024206 not found in 244aa AT5G57150.1 1st_1st 0.541950113 Ia
Pt009252 not found in 249aa AT5G57150.1 1st_1st 0.553287981 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G57150.1     ---MEDIVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIV
pt009252_POPTR_ MEPIENI-GEEYQNYWETKMFLQNE--ELDSWAIDEAFSGYYDSSSPDGAASSAATKNIV
gm024206_Glyma0 ---MENI-GEEYKHYWETNMFLQTQ--ELDSWGLDEALSGYYDSSSPDGAASSAASKNIV
                   :*:* .:* .:***.. ***.:  * *** ::**:** ************.*:****

AT5G57150.1     SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELES-T
pt009252_POPTR_ SERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQELHDQEKQIQAELSELESGK
gm024206_Glyma0 SERNRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKIIQAEIMELESGM
                ******:***:******:*****:************.**: *: :** ::**: ****  

AT5G57150.1     PKSSL-SFSKDFDRDLLVPVTSKKMKQLD------SGSSTSLIEVLELKVTFMGERTMVV
pt009252_POPTR_ SKKNQGGFGVYYHQELPVLLRSKK-KKIDYQFCDFGGSKISPIELLELRVAYMGENTLLV
gm024206_Glyma0 PRKSP-SYG-FEQEQLPVVLRSKK-KRTE-QLYDSVTSRNTPIEVLELRVTYMGEKTVVV
                .:..  .:.   ..:* * : *** *: :        *  : **:***:*::***.*::*

AT5G57150.1     SVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETG
pt009252_POPTR_ SLTCNKRTDTMVKLCEVFESLGLKIITANITTVSGRVLKTVFIEADEEEKDKLKIRIEAA
gm024206_Glyma0 SLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGRLLKTVFIEANEEEKDHLQIKIQTA
                *:**.**************** ***:*:*:*:.** :::******:***:: *:::*::.

AT5G57150.1     IGAY-NETQSPTLSIDSLY
pt009252_POPTR_ IAAL-NDPPSP-MSM----
gm024206_Glyma0 IKALNNDPLSP-MSI----
                * *  *:. ** :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G57150.1     - - - M E D I V D Q E L S N Y W E P S S F L Q N E D F E Y D S W P L E E A I S G S Y D S S S P D G A A S S P A S K N I V
pt009252_POPTR_    M E P I E N I - G E E Y Q N Y W E T K M F L Q N E - - E L D S W A I D E A F S G Y Y D S S S P D G A A S S A A T K N I V
gm024206_Glyma0    - - - M E N I - G E E Y K H Y W E T N M F L Q T Q - - E L D S W G L D E A L S G Y Y D S S S P D G A A S S A A S K N I V
 
AT5G57150.1     S E R N R R Q K L N Q R L F A L R S V V P N I T K M D K A S I I K D A I S Y I E G L Q Y E E K K L E A E I R E L E S - T
pt009252_POPTR_    S E R N R R K K L N E R L F A L R A V V P N I S K M D K A S I I K D A I D Y I Q E L H D Q E K Q I Q A E L S E L E S G K
gm024206_Glyma0    S E R N R R K K L N E R L F A L R S V V P N I S K M D K A S I I K D A I E Y I Q H L H E Q E K I I Q A E I M E L E S G M
 
AT5G57150.1     P K S S L - S F S K D F D R D L L V P V T S K K M K Q L D - - - - - - S G S S T S L I E V L E L K V T F M G E R T M V V
pt009252_POPTR_    S K K N Q G G F G V Y Y H Q E L P V L L R S K K - K K I D Y Q F C D F G G S K I S P I E L L E L R V A Y M G E N T L L V
gm024206_Glyma0    P R K S P - S Y G - F E Q E Q L P V V L R S K K - K R T E - Q L Y D S V T S R N T P I E V L E L R V T Y M G E K T V V V
 
AT5G57150.1     S V T C N K R T D T M V K L C E V F E S L N L K I L T S N L T S F S G M I F H T V F I E A D E E E Q E V L R L K I E T G
pt009252_POPTR_    S L T C N K R T D T M V K L C E V F E S L G L K I I T A N I T T V S G R V L K T V F I E A D E E E K D K L K I R I E A A
gm024206_Glyma0    S L T C S K R T D T M V K L C E V F E S L K L K I I T A N I T S F S G R L L K T V F I E A N E E E K D H L Q I K I Q T A
 
AT5G57150.1     I G A Y - N E T Q S P T L S I D S L Y
pt009252_POPTR_    I A A L - N D P P S P - M S M - - - -
gm024206_Glyma0    I K A L N N D P L S P - M S I - - - -
 
0