fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G57150.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009252 not found in 249aa AT5G57150.1 1st_1st 0.553287981 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G57150.1     MEDI--VDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIVS
pt009252_POPTR_ MEPIENIGEEYQNYWETKMFLQNE--ELDSWAIDEAFSGYYDSSSPDGAASSAATKNIVS
                ** *  :.:* .****.. *****  * ***.::**:** ************.*:*****

AT5G57150.1     ERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELES--T
pt009252_POPTR_ ERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQELHDQEKQIQAELSELESGKS
                *****:***:******:*****:************.**: *: :**:::**: ****  :

AT5G57150.1     PKSSLSFSKDFDRDLLVPVTSKKMKQLD------SGSSTSLIEVLELKVTFMGERTMVVS
pt009252_POPTR_ KKNQGGFGVYYHQELPVLLRSKK-KKIDYQFCDFGGSKISPIELLELRVAYMGENTLLVS
                 *.. .*.  :.::* * : *** *::*      .**. * **:***:*::***.*::**

AT5G57150.1     VTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGI
pt009252_POPTR_ LTCNKRTDTMVKLCEVFESLGLKIITANITTVSGRVLKTVFIEADEEEKDKLKIRIEAAI
                :*******************.***:*:*:*:.** :::**********:: *:::**:.*

AT5G57150.1     GAYNETQSPTLSIDSLY
pt009252_POPTR_ AALNDPPSP-MSM----
                .* *:. ** :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G57150.1     M E D I - - V D Q E L S N Y W E P S S F L Q N E D F E Y D S W P L E E A I S G S Y D S S S P D G A A S S P A S K N I V S
pt009252_POPTR_    M E P I E N I G E E Y Q N Y W E T K M F L Q N E - - E L D S W A I D E A F S G Y Y D S S S P D G A A S S A A T K N I V S
 
AT5G57150.1     E R N R R Q K L N Q R L F A L R S V V P N I T K M D K A S I I K D A I S Y I E G L Q Y E E K K L E A E I R E L E S - - T
pt009252_POPTR_    E R N R R K K L N E R L F A L R A V V P N I S K M D K A S I I K D A I D Y I Q E L H D Q E K Q I Q A E L S E L E S G K S
 
AT5G57150.1     P K S S L S F S K D F D R D L L V P V T S K K M K Q L D - - - - - - S G S S T S L I E V L E L K V T F M G E R T M V V S
pt009252_POPTR_    K K N Q G G F G V Y Y H Q E L P V L L R S K K - K K I D Y Q F C D F G G S K I S P I E L L E L R V A Y M G E N T L L V S
 
AT5G57150.1     V T C N K R T D T M V K L C E V F E S L N L K I L T S N L T S F S G M I F H T V F I E A D E E E Q E V L R L K I E T G I
pt009252_POPTR_    L T C N K R T D T M V K L C E V F E S L G L K I I T A N I T T V S G R V L K T V F I E A D E E E K D K L K I R I E A A I
 
AT5G57150.1     G A Y N E T Q S P T L S I D S L Y
pt009252_POPTR_    A A L N D P P S P - M S M - - - -
 
0