fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G57150.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024206 not found in 244aa AT5G57150.1 1st_1st 0.541950113 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G57150.1     MEDIVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASSPASKNIVSER
gm024206_Glyma0 MENI-GEEYKHYWETNMFLQTQ--ELDSWGLDEALSGYYDSSSPDGAASSAASKNIVSER
                **:* .:* .:***.. ***.:  * *** *:**:** ************.*********

AT5G57150.1     NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELES-TPKS
gm024206_Glyma0 NRRKKLNERLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKIIQAEIMELESGMPRK
                ***:***:************:************.**: *: :** ::*** ****  *:.

AT5G57150.1     SLSFSKDFDRDLLVPVT----SKKMKQL-DSGSS-TSLIEVLELKVTFMGERTMVVSVTC
gm024206_Glyma0 SPSYG--FEQEQL-PVVLRSKKKRTEQLYDSVTSRNTPIEVLELRVTYMGEKTVVVSLTC
                * *:.  *::: * **.    .*: :** ** :* .: ******:**:***:*:***:**

AT5G57150.1     NKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAY
gm024206_Glyma0 SKRTDTMVKLCEVFESLKLKIITANITSFSGRLLKTVFIEANEEEKDHLQIKIQTAIKAL
                .****************:***:*:*:***** :::******:***:: *::**:*.* * 

AT5G57150.1     NETQSPTLSIDSLY
gm024206_Glyma0 NNDPLSPMSI----
                *:   ..:**
BoxShade v3.31 C (beta, 970507) Output
AT5G57150.1     M E D I V D Q E L S N Y W E P S S F L Q N E D F E Y D S W P L E E A I S G S Y D S S S P D G A A S S P A S K N I V S E R
gm024206_Glyma0    M E N I - G E E Y K H Y W E T N M F L Q T Q - - E L D S W G L D E A L S G Y Y D S S S P D G A A S S A A S K N I V S E R
 
AT5G57150.1     N R R Q K L N Q R L F A L R S V V P N I T K M D K A S I I K D A I S Y I E G L Q Y E E K K L E A E I R E L E S - T P K S
gm024206_Glyma0    N R R K K L N E R L F A L R S V V P N I S K M D K A S I I K D A I E Y I Q H L H E Q E K I I Q A E I M E L E S G M P R K
 
AT5G57150.1     S L S F S K D F D R D L L V P V T - - - - S K K M K Q L - D S G S S - T S L I E V L E L K V T F M G E R T M V V S V T C
gm024206_Glyma0    S P S Y G - - F E Q E Q L - P V V L R S K K K R T E Q L Y D S V T S R N T P I E V L E L R V T Y M G E K T V V V S L T C
 
AT5G57150.1     N K R T D T M V K L C E V F E S L N L K I L T S N L T S F S G M I F H T V F I E A D E E E Q E V L R L K I E T G I G A Y
gm024206_Glyma0    S K R T D T M V K L C E V F E S L K L K I I T A N I T S F S G R L L K T V F I E A N E E E K D H L Q I K I Q T A I K A L
 
AT5G57150.1     N E T Q S P T L S I D S L Y
gm024206_Glyma0    N N D P L S P M S I - - - -
 
0