fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G57420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019287 not found in 169aa AT5G57420.1 1st_1st 0.419354838 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G57420.1     MNS---FEPQSQDSLQRRFHQDNSTTQQPRDTTTPFIPKPASKNHNNSNSSSGAAGRSFQ
Os019287_Os04t0 MISGAGGEQQQQQDTKRRLPAPTTSEQERR-----------QKQHR---------GKMLR
                * *    * *.*:. :**:   .:: *: *           .*:*.         *: ::

AT5G57420.1     GFGLNVE--DDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD---
Os019287_Os04t0 ---LSVQQGDDVTAGVVPPVTVVLDGRSICHRVHLSKHTGYRSLAAALRRMFVDADDDVG
                   *.*:  **:.:.*********:*****:*: *.** .*:***:***:****. *   

AT5G57420.1     ---------STDD-----LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL
Os019287_Os04t0 AADEAAGRSSCSDADRGGLDLSNAVPGHVVAYEDIENDLLLAGDLNWKDFVRVARRIRII
                         * .*     ******:***::****:**********.********:****:

AT5G57420.1     PVKGNTRQVKRNE
Os019287_Os04t0 PAKPSSRMRPQS-
                *.* .:*   :.
BoxShade v3.31 C (beta, 970507) Output
AT5G57420.1     M N S - - - F E P Q S Q D S L Q R R F H Q D N S T T Q Q P R D T T T P F I P K P A S K N H N N S N S S S G A A G R S F Q
Os019287_Os04t0    M I S G A G G E Q Q Q Q Q D T K R R L P A P T T S E Q E R R - - - - - - - - - - - Q K Q H R - - - - - - - - - G K M L R
 
AT5G57420.1     G F G L N V E - - D D L V S S V V P P V T V V L E G R S I C Q R I S L D K H G S Y Q S L A S A L R Q M F V D G A D - - -
Os019287_Os04t0    - - - L S V Q Q G D D V T A G V V P P V T V V L D G R S I C H R V H L S K H T G Y R S L A A A L R R M F V D A D D D V G
 
AT5G57420.1     - - - - - - - - - S T D D - - - - - L D L S N A I P G H L I A Y E D M E N D L L L A G D L T W K D F V R V A K R I R I L
Os019287_Os04t0    A A D E A A G R S S C S D A D R G G L D L S N A V P G H V V A Y E D I E N D L L L A G D L N W K D F V R V A R R I R I I
 
AT5G57420.1     P V K G N T R Q V K R N E
Os019287_Os04t0    P A K P S S R M R P Q S -
 
0