Input
| Putative repression domain
|
|
AT5G57520.1 |
YQPNTSLRLSLPSYKN at 7/150 in AT5G57520.1 |
|
HQLNLELVLEPS at 19/150 in AT5G57520.1 |
DQEKSHLDLSLRL at 142/150 in AT5G57520.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm046246 |
HDDENHLNLDLLLEPS in 20/136 |
AT5G57520.1 |
1st_1st |
0.388489208 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G57520.1 MDYQ-PNTSLRLSLPSYKNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQR
gm046246_Glyma1 MNFHNPNTSLHLSQHDDENH-LNLDLLLEP----SSSSSSSPSPICSMEPRIFSCNYCQR
*::: *****:** . :** ***:*:*** ******: *. * :**:********
AT5G57520.1 KFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFSGRFELYGRGYQ--GFL
gm046246_Glyma1 KFYSSQALGGHQNAHKLERTLAKKSREL---------------SLNMQSYGAAEQRSNF-
**************************** * .:: ** . * .*
AT5G57520.1 ESGGSRDFSARRVPESGLDQDQEKSHLDLSLRL---------
gm046246_Glyma1 --GASHHLGHRAL---GVVDNQGQSYVRLGGRKEFSYGSKEG
*.*:.:. * : *: ::* :*:: *. *
BoxShade v3.31 C (beta, 970507) Output
AT5G57520.1 |
M |
D |
Y |
Q |
- |
P |
N |
T |
S |
L |
R |
L |
S |
L |
P |
S |
Y |
K |
N |
H |
Q |
L |
N |
L |
E |
L |
V |
L |
E |
P |
S |
S |
M |
S |
S |
S |
S |
S |
S |
S |
T |
N |
S |
S |
S |
C |
L |
E |
Q |
P |
R |
V |
F |
S |
C |
N |
Y |
C |
Q |
R |
gm046246_Glyma1 |
M |
N |
F |
H |
N |
P |
N |
T |
S |
L |
H |
L |
S |
Q |
H |
D |
D |
E |
N |
H |
- |
L |
N |
L |
D |
L |
L |
L |
E |
P |
- |
- |
- |
- |
S |
S |
S |
S |
S |
S |
S |
P |
S |
P |
I |
C |
S |
M |
E |
P |
R |
I |
F |
S |
C |
N |
Y |
C |
Q |
R |
|
AT5G57520.1 |
K |
F |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
L |
E |
R |
T |
L |
A |
K |
K |
S |
R |
E |
L |
F |
R |
S |
S |
N |
T |
V |
D |
S |
D |
Q |
P |
Y |
P |
F |
S |
G |
R |
F |
E |
L |
Y |
G |
R |
G |
Y |
Q |
- |
- |
G |
F |
L |
gm046246_Glyma1 |
K |
F |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
L |
E |
R |
T |
L |
A |
K |
K |
S |
R |
E |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
L |
N |
M |
Q |
S |
Y |
G |
A |
A |
E |
Q |
R |
S |
N |
F |
- |
|
AT5G57520.1 |
E |
S |
G |
G |
S |
R |
D |
F |
S |
A |
R |
R |
V |
P |
E |
S |
G |
L |
D |
Q |
D |
Q |
E |
K |
S |
H |
L |
D |
L |
S |
L |
R |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm046246_Glyma1 |
- |
- |
G |
A |
S |
H |
H |
L |
G |
H |
R |
A |
L |
- |
- |
- |
G |
V |
V |
D |
N |
Q |
G |
Q |
S |
Y |
V |
R |
L |
G |
G |
R |
K |
E |
F |
S |
Y |
G |
S |
K |
E |
G |
|
|