fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G57620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046260 not found in 399aa AT5G57620.1 1st_1st 0.465040650 Ia
Gm034767 not found in 362aa AT5G57620.1 not_1st 0.458536585 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G57620.1     ----------------------------------MGRAPCCDKANVKKGPWSPEEDVKLK
gm046260_Glyma1 MEGLAKLIFASTKNRKRNLNRERERERERQQHKKMGRAPCCDKNNVKKGPWSPEEDATLK
gm034767_Glyma1 ----------------------------------MGRAPCCDKANVKKGPWSPEEDAALK
                                                  ********* ************. **

AT5G57620.1     DYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISI
gm046260_Glyma1 TYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISI
gm034767_Glyma1 AYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISI
                 **:* ***************************************:****.** ******

AT5G57620.1     GSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGRQKQMN--RQDSITDSTENNLSNNNNN
gm046260_Glyma1 GSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNFSSKDTNNGIEENSYSN----
gm034767_Glyma1 GSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNLSAKDTNNGIEENSYSN----
                *************************:********:** *   :*: ..  **. **    

AT5G57620.1     KSPQNLSNSALERLQLHMQLQNLQSPFSSFYNNPILWPKLHPL-------LQSTTTNQNP
gm046260_Glyma1 ----ALSTSALERLQLHMQLQSLQNPF-SFYNNPALWPKLHPIQEKMIHSLQSLNDGSNP
gm034767_Glyma1 ----ALSSSALERLQLHMQLQSLQNPF-SFYNNPALWPKLHPFQEKMIQSLQSLNDGSSP
                     **.*************.**.** ****** *******:       *** . ...*

AT5G57620.1     KLASQ-------------ESFHPLGVNVDHQHNNTKLAQINNGASSLYSENVE-------
gm046260_Glyma1 VMQNALPNSPHDEQGQKGEFYKP-------QHDG---AKINNPDQVHLLENIPLSNSGVP
gm034767_Glyma1 VMQNALPNSPHVEQGQKDEFCKP-------QHDG---AKINNP-QVHLLENIPLSNGGVP
                 : .              *  :*       **:.   *:***  .    **:        

AT5G57620.1     -----QSQNPAH-EFQP-----------NFGFSQ--------DLRLDNHNMDFMNRGVSK
gm046260_Glyma1 FVASGSSTNPMHSSLAPRSEAIHVQTNNNVGFQQLGALQNELDEILNNRTMGY----VPQ
gm034767_Glyma1 FVASGSSKNPMHSSLAPRSEAIHEQT-NSVGFQQLGALQTELDDILNNRIMGY----VPH
                     .* ** * .: *           ..**.*        *  *:*: *.:    *.:

AT5G57620.1     ELFQVG---NEFELTNGSS----WWSEEVELERKTTSSSSWGSASVLDQTTEGMVMLQDY
gm046260_Glyma1 EDHDMASGFDCFREMNDSKDSLIWWSNDS--DTKSASSNSWESSATPALLTQG--MFQDY
gm034767_Glyma1 EDHDMA-GFDCFREMNSSKDSLIWWSNDS--DTKSVSSNSWDSSATPALLPQG--MFQDY
                * .::.   : *.  *.*.    ***::   : *:.**.** *::.    .:*  *:***

AT5G57620.1     AQMSYHSV
gm046260_Glyma1 -ELGYSL-
gm034767_Glyma1 -ELGYSL-
                 ::.*
BoxShade v3.31 C (beta, 970507) Output
AT5G57620.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R A P C C D K A N V K K G P W S P E E D V K L K
gm046260_Glyma1    M E G L A K L I F A S T K N R K R N L N R E R E R E R E R Q Q H K K M G R A P C C D K N N V K K G P W S P E E D A T L K
gm034767_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R A P C C D K A N V K K G P W S P E E D A A L K
 
AT5G57620.1     D Y I D K Y G T G G N W I A L P Q K I G L K R C G K S C R L R W L N Y L R P N I K H G G F S E E E D R I I L S L Y I S I
gm046260_Glyma1    T Y I E K N G T G G N W I A L P Q K I G L K R C G K S C R L R W L N Y L R P N I K H G G F T E E E D N I I C S L Y I S I
gm034767_Glyma1    A Y I E K N G T G G N W I A L P Q K I G L K R C G K S C R L R W L N Y L R P N I K H G G F T E E E D N I I C S L Y I S I
 
AT5G57620.1     G S R W S I I A A Q L P G R T D N D I K N Y W N T K L K K K L L G R Q K Q M N - - R Q D S I T D S T E N N L S N N N N N
gm046260_Glyma1    G S R W S I I A A Q L P G R T D N D I K N Y W N T R L K K K L L G R R K Q S N F S S K D T N N G I E E N S Y S N - - - -
gm034767_Glyma1    G S R W S I I A A Q L P G R T D N D I K N Y W N T R L K K K L L G R R K Q S N L S A K D T N N G I E E N S Y S N - - - -
 
AT5G57620.1     K S P Q N L S N S A L E R L Q L H M Q L Q N L Q S P F S S F Y N N P I L W P K L H P L - - - - - - - L Q S T T T N Q N P
gm046260_Glyma1    - - - - A L S T S A L E R L Q L H M Q L Q S L Q N P F - S F Y N N P A L W P K L H P I Q E K M I H S L Q S L N D G S N P
gm034767_Glyma1    - - - - A L S S S A L E R L Q L H M Q L Q S L Q N P F - S F Y N N P A L W P K L H P F Q E K M I Q S L Q S L N D G S S P
 
AT5G57620.1     K L A S Q - - - - - - - - - - - - - E S F H P L G V N V D H Q H N N T K L A Q I N N G A S S L Y S E N V E - - - - - - -
gm046260_Glyma1    V M Q N A L P N S P H D E Q G Q K G E F Y K P - - - - - - - Q H D G - - - A K I N N P D Q V H L L E N I P L S N S G V P
gm034767_Glyma1    V M Q N A L P N S P H V E Q G Q K D E F C K P - - - - - - - Q H D G - - - A K I N N P - Q V H L L E N I P L S N G G V P
 
AT5G57620.1     - - - - - Q S Q N P A H - E F Q P - - - - - - - - - - - N F G F S Q - - - - - - - - D L R L D N H N M D F M N R G V S K
gm046260_Glyma1    F V A S G S S T N P M H S S L A P R S E A I H V Q T N N N V G F Q Q L G A L Q N E L D E I L N N R T M G Y - - - - V P Q
gm034767_Glyma1    F V A S G S S K N P M H S S L A P R S E A I H E Q T - N S V G F Q Q L G A L Q T E L D D I L N N R I M G Y - - - - V P H
 
AT5G57620.1     E L F Q V G - - - N E F E L T N G S S - - - - W W S E E V E L E R K T T S S S S W G S A S V L D Q T T E G M V M L Q D Y
gm046260_Glyma1    E D H D M A S G F D C F R E M N D S K D S L I W W S N D S - - D T K S A S S N S W E S S A T P A L L T Q G - - M F Q D Y
gm034767_Glyma1    E D H D M A - G F D C F R E M N S S K D S L I W W S N D S - - D T K S V S S N S W D S S A T P A L L P Q G - - M F Q D Y
 
AT5G57620.1     A Q M S Y H S V
gm046260_Glyma1    - E L G Y S L -
gm034767_Glyma1    - E L G Y S L -
 
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