fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042874 not found in 475aa AT2G24260.1 1st_not 0.438053097 II
Pt009623 not found in 455aa AT2G24260.1 1st_not 0.411504424 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G58010.1     MENGNGEGKG-------------------------------------EFI--NQNNDFFL
pt009623_POPTR_ MQPCSREMQGINSLLNPSSQIPLQDLQNQQNPSQIQNS---------HFDPNSSSNDDFL
gm042874_Glyma1 MQPCSKEMQGLNSLLNSSSQISLQDLQNHTT-NQIQNSHMNHQHQLAHFD--STSHDDFL
                *:  . * :*                                     .*   . .:* **

AT5G58010.1     DSMSMLSSLPPC------------WD---P--------SLPPP--------PPPPQS---
pt009623_POPTR_ E--QMLSNIPPCSWPDL--KSP--WDLTMPINNNDSSNSIAKPRDLSDETAPSNTDN---
gm042874_Glyma1 E--QMLSS---CSWTDLNPNKPLLWD---P----NTLNDIKPP----DETTPSNNNNDAT
                :  .***.   *            **   *        .:  *        *.  :.   

AT5G58010.1     ----------------------------------------LFHALAVDA-------P--F
pt009623_POPTR_ SNLGFHNNFDESVILASKLRQHQISGGGGA---AAAAKMMLQQQLLMAAARGV------L
gm042874_Glyma1 TNVASFSSFDEHSTLASKFRNHQISSNNNAPKNAAAAALMLQHQLLRDS--GLLNMPLSL
                                                        * : *   :          :

AT5G58010.1     P---------------------------------------------DQFHHPQESGGPTM
pt009623_POPTR_ PQND-VIDGSSFK----GGDGSMQGLFNGFGAGSMNGTGQASNQSMQHFNHPQGGA--MQ
gm042874_Glyma1 PGNDVVVDASTFESPNPSGKASVQTFYNGF-AGSLHGVGQSSNQT-QHFQHPQGSSNPMQ
                *                                             ::*:*** ..    

AT5G58010.1     GSQEGLQPQGTVSTTSAPVVRQ----------KPRVRARRGQATDPHSIAERLRRERIAE
pt009623_POPTR_ AQNFGAQGAATTAVMNQPQASG-SNGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAE
gm042874_Glyma1 GQNFGAVPAGGGSATNQAPASGAAAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAE
                ..: *    .  :. . . .            : **************************

AT5G58010.1     RMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEA
pt009623_POPTR_ RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEA
gm042874_Glyma1 RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEG
                ***:*******:*************:**:*****************.:*.* : .:*:*.

AT5G58010.1     GGRLNALTA---PCNG--------LNGNGNA-TGSSNESLRSTEQRVAKLMEEDMGSAMQ
pt009623_POPTR_ GG--DCIQA---SADGGSLSRT--SNGNQTARTNDS--SLTVTEHQVAKLMEEDMGSAMQ
gm042874_Glyma1 GG--DCIQANGKSNGGGAQASTTNTNTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQ
                **  :.: *   . .*         * * .: *  *  **  **::**************

AT5G58010.1     YLQGKGLCLMPISLATAISSSTTHSRGSLFNPISSAVAAE-----DSNVTATAVAAPEAS
pt009623_POPTR_ YLQGKGLCLMPISLATAISTATCHNR----SPAIN---NNHHALLQSN--GEGPASPSMS
gm042874_Glyma1 YLQGKGLCLMPISLATAISTATCPTRNVNVNPLINAAAGATHFPTAANPAGEGPSSPSMS
                *******************::*  .*    .*  .           :*  . . ::*. *

AT5G58010.1     -----------------STMDDVSASKA
pt009623_POPTR_ VLTVQSATMGNVGGDGGAVKDAASVSKP
gm042874_Glyma1 VLTVQSAIAGNDG--------AASVSKP
                                      .*.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E F I - - N Q N N D F F L
pt009623_POPTR_    M Q P C S R E M Q G I N S L L N P S S Q I P L Q D L Q N Q Q N P S Q I Q N S - - - - - - - - - H F D P N S S S N D D F L
gm042874_Glyma1    M Q P C S K E M Q G L N S L L N S S S Q I S L Q D L Q N H T T - N Q I Q N S H M N H Q H Q L A H F D - - S T S H D D F L
 
AT5G58010.1     D S M S M L S S L P P C - - - - - - - - - - - - W D - - - P - - - - - - - - S L P P P - - - - - - - - P P P P Q S - - -
pt009623_POPTR_    E - - Q M L S N I P P C S W P D L - - K S P - - W D L T M P I N N N D S S N S I A K P R D L S D E T A P S N T D N - - -
gm042874_Glyma1    E - - Q M L S S - - - C S W T D L N P N K P L L W D - - - P - - - - N T L N D I K P P - - - - D E T T P S N N N N D A T
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L F H A L A V D A - - - - - - - P - - F
pt009623_POPTR_    S N L G F H N N F D E S V I L A S K L R Q H Q I S G G G G A - - - A A A A K M M L Q Q Q L L M A A A R G V - - - - - - L
gm042874_Glyma1    T N V A S F S S F D E H S T L A S K F R N H Q I S S N N N A P K N A A A A A L M L Q H Q L L R D S - - G L L N M P L S L
 
AT5G58010.1     P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D Q F H H P Q E S G G P T M
pt009623_POPTR_    P Q N D - V I D G S S F K - - - - G G D G S M Q G L F N G F G A G S M N G T G Q A S N Q S M Q H F N H P Q G G A - - M Q
gm042874_Glyma1    P G N D V V V D A S T F E S P N P S G K A S V Q T F Y N G F - A G S L H G V G Q S S N Q T - Q H F Q H P Q G S S N P M Q
 
AT5G58010.1     G S Q E G L Q P Q G T V S T T S A P V V R Q - - - - - - - - - - K P R V R A R R G Q A T D P H S I A E R L R R E R I A E
pt009623_POPTR_    A Q N F G A Q G A A T T A V M N Q P Q A S G - S N G G A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E
gm042874_Glyma1    G Q N F G A V P A G G G S A T N Q A P A S G A A A G G A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E
 
AT5G58010.1     R M K S L Q E L V P N T N K T D K A S M L D E I I E Y V R F L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A
pt009623_POPTR_    R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A
gm042874_Glyma1    R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E G
 
AT5G58010.1     G G R L N A L T A - - - P C N G - - - - - - - - L N G N G N A - T G S S N E S L R S T E Q R V A K L M E E D M G S A M Q
pt009623_POPTR_    G G - - D C I Q A - - - S A D G G S L S R T - - S N G N Q T A R T N D S - - S L T V T E H Q V A K L M E E D M G S A M Q
gm042874_Glyma1    G G - - D C I Q A N G K S N G G G A Q A S T T N T N T N Q T T A T T T S N D S L T M T E H Q V A K L M E E D M G S A M Q
 
AT5G58010.1     Y L Q G K G L C L M P I S L A T A I S S S T T H S R G S L F N P I S S A V A A E - - - - - D S N V T A T A V A A P E A S
pt009623_POPTR_    Y L Q G K G L C L M P I S L A T A I S T A T C H N R - - - - S P A I N - - - N N H H A L L Q S N - - G E G P A S P S M S
gm042874_Glyma1    Y L Q G K G L C L M P I S L A T A I S T A T C P T R N V N V N P L I N A A A G A T H F P T A A N P A G E G P S S P S M S
 
AT5G58010.1     - - - - - - - - - - - - - - - - - S T M D D V S A S K A
pt009623_POPTR_    V L T V Q S A T M G N V G G D G G A V K D A A S V S K P
gm042874_Glyma1    V L T V Q S A I A G N D G - - - - - - - - A A S V S K P
 
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