fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009623 not found in 455aa AT2G24260.1 1st_not 0.411504424 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58010.1     MENGNGEGKG--------------EFINQ----------------NNDFFLDSMSMLSSL
pt009623_POPTR_ MQPCSREMQGINSLLNPSSQIPLQDLQNQQNPSQIQNSHFDPNSSSNDDFLE--QMLSNI
                *:  . * :*              :: **                .** **:  .***.:

AT5G58010.1     PPC--------WDPSLP-------PPPPPPQSL---------------FH----------
pt009623_POPTR_ PPCSWPDLKSPWDLTMPINNNDSSNSIAKPRDLSDETAPSNTDNSNLGFHNNFDESVILA
                ***        ** ::*        . . *:.*               **          

AT5G58010.1     --------------ALAVDAPFPDQ-----------------------------------
pt009623_POPTR_ SKLRQHQISGGGGAAAAAKMMLQQQLLMAAARGVLPQNDVIDGSSFKGGDGSMQGLFNGF
                              * *..  : :*                                   

AT5G58010.1     ------------------FHHPQESGGPTMGSQEGL----------QPQGTVSTTSAPVV
pt009623_POPTR_ GAGSMNGTGQASNQSMQHFNHPQ--GGAMQAQNFGAQGAATTAVMNQPQASGSNGGAP-A
                                  *:***  **.  ..: *           ***.: *. .** .

AT5G58010.1     RQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRF
pt009623_POPTR_ QPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKF
                : : *****************************:*******:*************:**:*

AT5G58010.1     LQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNG----LNGNGNATGSSNE
pt009623_POPTR_ LQLQVKVLSMSRLGGAAAVAPLVADMSSEAGG--DCIQASADGGSLSRTSNGNQTARTND
                ****************.:*.* : .:*:****  :.: *..:*     ..*** *. :*:

AT5G58010.1     -SLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFN------
pt009623_POPTR_ SSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRSPAINNNHHAL
                 **  **::*********************************::* *.*.. :*      

AT5G58010.1     -------PISSAVAAEDSNVTATAVAAPEASSTMDDVSASKA
pt009623_POPTR_ LQSNGEGPASPSMSVLTVQSATMGNVGGDGGAVKDAASVSKP
                       * *.:::.   : :: . .. :..:. * .*.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - E F I N Q - - - - - - - - - - - - - - - - N N D F F L D S M S M L S S L
pt009623_POPTR_    M Q P C S R E M Q G I N S L L N P S S Q I P L Q D L Q N Q Q N P S Q I Q N S H F D P N S S S N D D F L E - - Q M L S N I
 
AT5G58010.1     P P C - - - - - - - - W D P S L P - - - - - - - P P P P P P Q S L - - - - - - - - - - - - - - - F H - - - - - - - - - -
pt009623_POPTR_    P P C S W P D L K S P W D L T M P I N N N D S S N S I A K P R D L S D E T A P S N T D N S N L G F H N N F D E S V I L A
 
AT5G58010.1     - - - - - - - - - - - - - - A L A V D A P F P D Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt009623_POPTR_    S K L R Q H Q I S G G G G A A A A A K M M L Q Q Q L L M A A A R G V L P Q N D V I D G S S F K G G D G S M Q G L F N G F
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - F H H P Q E S G G P T M G S Q E G L - - - - - - - - - - Q P Q G T V S T T S A P V V
pt009623_POPTR_    G A G S M N G T G Q A S N Q S M Q H F N H P Q - - G G A M Q A Q N F G A Q G A A T T A V M N Q P Q A S G S N G G A P - A
 
AT5G58010.1     R Q K P R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N T N K T D K A S M L D E I I E Y V R F
pt009623_POPTR_    Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F
 
AT5G58010.1     L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A G G R L N A L T A P C N G - - - - L N G N G N A T G S S N E
pt009623_POPTR_    L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G - - D C I Q A S A D G G S L S R T S N G N Q T A R T N D
 
AT5G58010.1     - S L R S T E Q R V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S S S T T H S R G S L F N - - - - - -
pt009623_POPTR_    S S L T V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R S P A I N N N H H A L
 
AT5G58010.1     - - - - - - - P I S S A V A A E D S N V T A T A V A A P E A S S T M D D V S A S K A
pt009623_POPTR_    L Q S N G E G P A S P S M S V L T V Q S A T M G N V G G D G G A V K D A A S V S K P
 
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