fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006766 not found in 448aa AT2G24260.1 not_not 0.411504424 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58010.1     MENGNGEGKG--------------EFINQ------------NNDFFLDSMSMLSSLPPC-
pt006766_POPTR_ MRPCSREMQGMNSLLNPSSQIPLQDLQNQQIQNSHFDPNSSSNDDFLE--QMLSAIPSCS
                *.  . * :*              :: **            .** **:  .***::*.* 

AT5G58010.1     W-DPSLP----PP---PPP---------PQSLF---------------------------
pt006766_POPTR_ WADPKSPWDLNPPTNLPFPTNNNSSSAKPRDLFNETPPSNTDNNNVGFHDNFDESVILAS
                * **. *    **   * *         *:.**                           

AT5G58010.1     ----HALA-------------------------------VDAPFPDQ-------------
pt006766_POPTR_ KLRQHQISGGSGAAAAAKMMLQQQLLMAAARGGLSQNDDIDVS-PTQGGDGSMQGLFNGF
                    * ::                               :*.. * *             

AT5G58010.1     ------------------FHHPQESGG----PTMGSQEGL------QPQGTVSTTSAPVV
pt006766_POPTR_ RAGSMNGTVRASNQSMQHFNHPQ--GGAMQSPNLGAQGAATTAVMNQPQASGSNGGAP-A
                                  *:***  **    *.:*:* .       ***.: *. .** .

AT5G58010.1     RQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRF
pt006766_POPTR_ QPRQRVRARRGQATDPHSIAERV-LERIAERMKALQELVPNANKTDKASMLDEIIDYVKF
                : : ******************:  ********:*******:*************:**:*

AT5G58010.1     LQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNG----LNGNGNATGSSNE
pt006766_POPTR_ LQLQVKVLSMSRLGGAAAVAPLVADMSSEAGG--DCIQANANGGSIARTTNGNQTASTND
                ****************.:*.* : .:*:****  :.: * .**     . *** *.*:*:

AT5G58010.1     -SLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGS----LFNPI
pt006766_POPTR_ SSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRTSGIINSHNPL
                 **  **::*********************************::* *.* *     .**:

AT5G58010.1     --SSAVAAEDSNVTATAVAAPEASSTM------DDVSASKA
pt006766_POPTR_ LQSNGEGPTSPSMSVLTV----QSATMGNGVAKDAASVSKP
                  *.. .. ...::. :*     *:**      * .*.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - E F I N Q - - - - - - - - - - - - N N D F F L D S M S M L S S L P P C -
pt006766_POPTR_    M R P C S R E M Q G M N S L L N P S S Q I P L Q D L Q N Q Q I Q N S H F D P N S S S N D D F L E - - Q M L S A I P S C S
 
AT5G58010.1     W - D P S L P - - - - P P - - - P P P - - - - - - - - - P Q S L F - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt006766_POPTR_    W A D P K S P W D L N P P T N L P F P T N N N S S S A K P R D L F N E T P P S N T D N N N V G F H D N F D E S V I L A S
 
AT5G58010.1     - - - - H A L A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V D A P F P D Q - - - - - - - - - - - - -
pt006766_POPTR_    K L R Q H Q I S G G S G A A A A A K M M L Q Q Q L L M A A A R G G L S Q N D D I D V S - P T Q G G D G S M Q G L F N G F
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - F H H P Q E S G G - - - - P T M G S Q E G L - - - - - - Q P Q G T V S T T S A P V V
pt006766_POPTR_    R A G S M N G T V R A S N Q S M Q H F N H P Q - - G G A M Q S P N L G A Q G A A T T A V M N Q P Q A S G S N G G A P - A
 
AT5G58010.1     R Q K P R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N T N K T D K A S M L D E I I E Y V R F
pt006766_POPTR_    Q P R Q R V R A R R G Q A T D P H S I A E R V - L E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F
 
AT5G58010.1     L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A G G R L N A L T A P C N G - - - - L N G N G N A T G S S N E
pt006766_POPTR_    L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G - - D C I Q A N A N G G S I A R T T N G N Q T A S T N D
 
AT5G58010.1     - S L R S T E Q R V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S S S T T H S R G S - - - - L F N P I
pt006766_POPTR_    S S L T V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R T S G I I N S H N P L
 
AT5G58010.1     - - S S A V A A E D S N V T A T A V A A P E A S S T M - - - - - - D D V S A S K A
pt006766_POPTR_    L Q S N G E G P T S P S M S V L T V - - - - Q S A T M G N G V A K D A A S V S K P
 
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