fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009623 not found in 455aa AT2G24260.1 1st_not 0.411504424 II
Pt006766 not found in 448aa AT2G24260.1 not_not 0.411504424 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G58010.1     MENGNGEGKG--------------EFINQ----------------NNDFFLDSMSMLSSL
pt006766_POPTR_ MRPCSREMQGMNSLLNPSSQIPLQDLQNQ----QIQNSHFDPNSSSNDDFLE--QMLSAI
pt009623_POPTR_ MQPCSREMQGINSLLNPSSQIPLQDLQNQQNPSQIQNSHFDPNSSSNDDFLE--QMLSNI
                *.  . * :*              :: **                .** **:  .*** :

AT5G58010.1     PPC--------WDPSLP---PPP---------PPPQSL---------------FH-----
pt006766_POPTR_ PSCSWADPKSPWDLNPPTNLPFPTNNNSSS--AKPRDLFNETPPSNTDNNNVGFHDNFDE
pt009623_POPTR_ PPCSWPDLKSPWDLTMPIN-----NNDSSNSIAKPRDLSDETAPSNTDNSNLGFHNNFDE
                *.*        ** . *               . *:.*               **     

AT5G58010.1     -------------------ALAVDAPFPDQ------------------------------
pt006766_POPTR_ SVILASKLRQHQISGGSGAAAAAKMMLQQQLLMAAARGGLSQNDDIDVSPTQGGDGSMQG
pt009623_POPTR_ SVILASKLRQHQISGGGGAAAAAKMMLQQQLLMAAARGVLPQNDVIDGSSFKGGDGSMQG
                                   * *..  : :*                              

AT5G58010.1     -----------------------FHHPQESGG----PTMGSQEGL------QPQGTVSTT
pt006766_POPTR_ LFNGFRAGSMNGTVRASNQSMQHFNHPQ--GGAMQSPNLGAQGAATTAVMNQPQASGSNG
pt009623_POPTR_ LFNGFGAGSMNGTGQASNQSMQHFNHPQ--GGAMQAQNFGAQGAATTAVMNQPQASGSNG
                                       *:***  **     .:*:* .       ***.: *. 

AT5G58010.1     SAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEII
pt006766_POPTR_ GAP-AQPRQRVRARRGQATDPHSIAERV-LERIAERMKALQELVPNANKTDKASMLDEII
pt009623_POPTR_ GAP-AQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEII
                .** .: : ******************:  ********:*******:*************

AT5G58010.1     EYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAPCNG----LNGNGNAT
pt006766_POPTR_ DYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAGG--DCIQANANGGSIARTTNGNQT
pt009623_POPTR_ DYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAGG--DCIQASADGGSLSRTSNGNQT
                :**:*****************.:*.* : .:*:****  :.: * .:*     . *** *

AT5G58010.1     GSSNE-SLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFN-
pt006766_POPTR_ ASTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRTSGIIN
pt009623_POPTR_ ARTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRSPAINN
                . :*: **  **::*********************************::* *.* . :  

AT5G58010.1     ------------PISSAVAAEDSNVTATAVAAPEASSTMDDVSASKA
pt006766_POPTR_ SHNPLLQSNGEGPTSPSMSVLTVQSATMGN-----GVAKDAASVSKP
pt009623_POPTR_ NHHALLQSNGEGPASPSMSVLTVQSATMGNVGGDGGAVKDAASVSKP
                            * *.:::.   : :: .      . . * .*.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - E F I N Q - - - - - - - - - - - - - - - - N N D F F L D S M S M L S S L
pt006766_POPTR_    M R P C S R E M Q G M N S L L N P S S Q I P L Q D L Q N Q - - - - Q I Q N S H F D P N S S S N D D F L E - - Q M L S A I
pt009623_POPTR_    M Q P C S R E M Q G I N S L L N P S S Q I P L Q D L Q N Q Q N P S Q I Q N S H F D P N S S S N D D F L E - - Q M L S N I
 
AT5G58010.1     P P C - - - - - - - - W D P S L P - - - P P P - - - - - - - - - P P P Q S L - - - - - - - - - - - - - - - F H - - - - -
pt006766_POPTR_    P S C S W A D P K S P W D L N P P T N L P F P T N N N S S S - - A K P R D L F N E T P P S N T D N N N V G F H D N F D E
pt009623_POPTR_    P P C S W P D L K S P W D L T M P I N - - - - - N N D S S N S I A K P R D L S D E T A P S N T D N S N L G F H N N F D E
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - A L A V D A P F P D Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt006766_POPTR_    S V I L A S K L R Q H Q I S G G S G A A A A A K M M L Q Q Q L L M A A A R G G L S Q N D D I D V S P T Q G G D G S M Q G
pt009623_POPTR_    S V I L A S K L R Q H Q I S G G G G A A A A A K M M L Q Q Q L L M A A A R G V L P Q N D V I D G S S F K G G D G S M Q G
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - - - - - F H H P Q E S G G - - - - P T M G S Q E G L - - - - - - Q P Q G T V S T T
pt006766_POPTR_    L F N G F R A G S M N G T V R A S N Q S M Q H F N H P Q - - G G A M Q S P N L G A Q G A A T T A V M N Q P Q A S G S N G
pt009623_POPTR_    L F N G F G A G S M N G T G Q A S N Q S M Q H F N H P Q - - G G A M Q A Q N F G A Q G A A T T A V M N Q P Q A S G S N G
 
AT5G58010.1     S A P V V R Q K P R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N T N K T D K A S M L D E I I
pt006766_POPTR_    G A P - A Q P R Q R V R A R R G Q A T D P H S I A E R V - L E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I
pt009623_POPTR_    G A P - A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I
 
AT5G58010.1     E Y V R F L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A G G R L N A L T A P C N G - - - - L N G N G N A T
pt006766_POPTR_    D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G - - D C I Q A N A N G G S I A R T T N G N Q T
pt009623_POPTR_    D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G - - D C I Q A S A D G G S L S R T S N G N Q T
 
AT5G58010.1     G S S N E - S L R S T E Q R V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S S S T T H S R G S L F N -
pt006766_POPTR_    A S T N D S S L T V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R T S G I I N
pt009623_POPTR_    A R T N D S S L T V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R S P A I N N
 
AT5G58010.1     - - - - - - - - - - - - P I S S A V A A E D S N V T A T A V A A P E A S S T M D D V S A S K A
pt006766_POPTR_    S H N P L L Q S N G E G P T S P S M S V L T V Q S A T M G N - - - - - G V A K D A A S V S K P
pt009623_POPTR_    N H H A L L Q S N G E G P A S P S M S V L T V Q S A T M G N V G G D G G A V K D A A S V S K P
 
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