fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042874 not found in 475aa AT2G24260.1 1st_not 0.438053097 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58010.1     MENGNGEGKG------------------------------------EFINQNNDFFLDSM
gm042874_Glyma1 MQPCSKEMQGLNSLLNSSSQISLQDLQNHTTNQIQNSHMNHQHQLAHFDSTSHDDFLE--
                *:  . * :*                                    .* . .:* **:  

AT5G58010.1     SMLSSL---------PPCWDPSL-----PPPPPPPQS-----------------------
gm042874_Glyma1 QMLSSCSWTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASFSSFDEHSTLAS
                .****          *  ***.      **  ..*..                       

AT5G58010.1     -----------------------LFHAL------------------AVDA-----PFPD-
gm042874_Glyma1 KFRNHQISSNNNAPKNAAAAALMLQHQLLRDSGLLNMPLSLPGNDVVVDASTFESPNPSG
                                       * * *                  .***     * *. 

AT5G58010.1     --------------------------QFHHPQESGGPTMGSQEGLQPQGTVSTTS-APV-
gm042874_Glyma1 KASVQTFYNGFAGSLHGVGQSSNQTQHFQHPQGSSNPMQGQNFGAVPAGGGSATNQAPAS
                                          :*:*** *..*  *.: *  * *  *:*. **. 

AT5G58010.1     --------VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASML
gm042874_Glyma1 GAAAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASML
                        .: : *****************************:*******:*********

AT5G58010.1     DEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAG-------GRLNALTAPCNGL
gm042874_Glyma1 DEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGKSNGGGAQASTT
                ****:**:*****************.:*.* : .:*:*.*       *: *.  * ..  

AT5G58010.1     NGNGN---ATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTT
gm042874_Glyma1 NTNTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATC
                * * *   ** :**:**  **::*********************************::* 

AT5G58010.1     HSRGSLFNPISSAVAAEDSNVTATAVAAPEASSTMDDV--------------SASKA
gm042874_Glyma1 PTRNVNVNPLINAAAGATHFPTAANPAGEGPSSPSMSVLTVQSAIAGNDGAASVSKP
                 :*.  .**: .*.*.     **:  *.  .**.  .*              *.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E F I N Q N N D F F L D S M
gm042874_Glyma1    M Q P C S K E M Q G L N S L L N S S S Q I S L Q D L Q N H T T N Q I Q N S H M N H Q H Q L A H F D S T S H D D F L E - -
 
AT5G58010.1     S M L S S L - - - - - - - - - P P C W D P S L - - - - - P P P P P P P Q S - - - - - - - - - - - - - - - - - - - - - - -
gm042874_Glyma1    Q M L S S C S W T D L N P N K P L L W D P N T L N D I K P P D E T T P S N N N N D A T T N V A S F S S F D E H S T L A S
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - - - - - L F H A L - - - - - - - - - - - - - - - - - - A V D A - - - - - P F P D -
gm042874_Glyma1    K F R N H Q I S S N N N A P K N A A A A A L M L Q H Q L L R D S G L L N M P L S L P G N D V V V D A S T F E S P N P S G
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - - - - - - - - Q F H H P Q E S G G P T M G S Q E G L Q P Q G T V S T T S - A P V -
gm042874_Glyma1    K A S V Q T F Y N G F A G S L H G V G Q S S N Q T Q H F Q H P Q G S S N P M Q G Q N F G A V P A G G G S A T N Q A P A S
 
AT5G58010.1     - - - - - - - - V R Q K P R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P N T N K T D K A S M L
gm042874_Glyma1    G A A A G G A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A N K T D K A S M L
 
AT5G58010.1     D E I I E Y V R F L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A G - - - - - - - G R L N A L T A P C N G L
gm042874_Glyma1    D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E G G G D C I Q A N G K S N G G G A Q A S T T
 
AT5G58010.1     N G N G N - - - A T G S S N E S L R S T E Q R V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S S S T T
gm042874_Glyma1    N T N T N Q T T A T T T S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C
 
AT5G58010.1     H S R G S L F N P I S S A V A A E D S N V T A T A V A A P E A S S T M D D V - - - - - - - - - - - - - - S A S K A
gm042874_Glyma1    P T R N V N V N P L I N A A A G A T H F P T A A N P A G E G P S S P S M S V L T V Q S A I A G N D G A A S V S K P
 
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