fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024559 not found in 490aa AT2G24260.1 not_not 0.415929203 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58010.1     MENGNGEGKG-------------------------------------------------E
gm024559_Glyma0 MQPCSREMQGLNSLLNSSSQISLQDLHNHTTNQIQNSHMNHQHHHQQQQQHQQQQHQLAH
                *:  . * :*                                                 .

AT5G58010.1     FINQNNDFFLDSMSMLSSL---------PPCWDPSLPPPPPPPQS---------------
gm024559_Glyma0 FDSTSHDDFLE--QMLSSCSWTDLNHNKPLLWDPNTPNDIKPPDETTPSNNNDDATANVV
                * . .:* **:  .****          *  ***. *    **:.               

AT5G58010.1     ----------------------------------LFHAL-----------------AVDA
gm024559_Glyma0 FPSFDEHSTLASKFRNHQISPNNAPKNAAAAAFMLQHQLLRDSGLLNMPLSLPGNDVVDA
                                                  * * *                 .***

AT5G58010.1     -----PFP---------------------------DQFHHPQESGGPTMGSQEGLQPQGT
gm024559_Glyma0 SSFKSPNPGGEASVQALYNGFAGSLHGAGQSSNQTQHFQNPQGSSNPMQGQNFGAAPAGG
                     * *                           ::*::** *..*  *.: *  * * 

AT5G58010.1     VSTTS-----------APVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVP
gm024559_Glyma0 GGATNQAPGSGAAAGGAP-AQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVP
                 .:*.           ** .: : *****************************:******

AT5G58010.1     NTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNALTAP
gm024559_Glyma0 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMYSEGGG-------D
                *:*************:**:*****************.:*.* : .: :*.**        

AT5G58010.1     CNGLNGNGN---------------ATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGL
gm024559_Glyma0 CIQANGNSNGGGAHAPNSNTNQTSATTPSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGL
                *   ***.*               ** .**:**  **::*********************

AT5G58010.1     CLMPISLATAISSSTTHSRGSL--FNPISSAVAAEDSNVTA------------------T
gm024559_Glyma0 CLMPISLATAISTATCHTRNVTVNVNPLINAAAAAQIPTAANPAGDGPSSPSMSVLTVQS
                ************::* *:*.    .**: .*.** :  .:*                  :

AT5G58010.1     AVAAPEASSTMDD-VSASKA
gm024559_Glyma0 AVAVNDGSAAVKDAASVSKP
                ***. :.*:::.* .*.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E
gm024559_Glyma0    M Q P C S R E M Q G L N S L L N S S S Q I S L Q D L H N H T T N Q I Q N S H M N H Q H H H Q Q Q Q Q H Q Q Q Q H Q L A H
 
AT5G58010.1     F I N Q N N D F F L D S M S M L S S L - - - - - - - - - P P C W D P S L P P P P P P P Q S - - - - - - - - - - - - - - -
gm024559_Glyma0    F D S T S H D D F L E - - Q M L S S C S W T D L N H N K P L L W D P N T P N D I K P P D E T T P S N N N D D A T A N V V
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L F H A L - - - - - - - - - - - - - - - - - A V D A
gm024559_Glyma0    F P S F D E H S T L A S K F R N H Q I S P N N A P K N A A A A A F M L Q H Q L L R D S G L L N M P L S L P G N D V V D A
 
AT5G58010.1     - - - - - P F P - - - - - - - - - - - - - - - - - - - - - - - - - - - D Q F H H P Q E S G G P T M G S Q E G L Q P Q G T
gm024559_Glyma0    S S F K S P N P G G E A S V Q A L Y N G F A G S L H G A G Q S S N Q T Q H F Q N P Q G S S N P M Q G Q N F G A A P A G G
 
AT5G58010.1     V S T T S - - - - - - - - - - - A P V V R Q K P R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E L V P
gm024559_Glyma0    G G A T N Q A P G S G A A A G G A P - A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P
 
AT5G58010.1     N T N K T D K A S M L D E I I E Y V R F L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A G G R L N A L T A P
gm024559_Glyma0    N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M Y S E G G G - - - - - - - D
 
AT5G58010.1     C N G L N G N G N - - - - - - - - - - - - - - - A T G S S N E S L R S T E Q R V A K L M E E D M G S A M Q Y L Q G K G L
gm024559_Glyma0    C I Q A N G N S N G G G A H A P N S N T N Q T S A T T P S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L
 
AT5G58010.1     C L M P I S L A T A I S S S T T H S R G S L - - F N P I S S A V A A E D S N V T A - - - - - - - - - - - - - - - - - - T
gm024559_Glyma0    C L M P I S L A T A I S T A T C H T R N V T V N V N P L I N A A A A A Q I P T A A N P A G D G P S S P S M S V L T V Q S
 
AT5G58010.1     A V A A P E A S S T M D D - V S A S K A
gm024559_Glyma0    A V A V N D G S A A V K D A A S V S K P
 
0