fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042874 not found in 475aa AT2G24260.1 1st_not 0.438053097 II
Gm024559 not found in 490aa AT2G24260.1 not_not 0.415929203 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G58010.1     MENGNGEGKG-------------------------------------------------E
gm024559_Glyma0 MQPCSREMQGLNSLLNSSSQISLQDLHNHTTNQIQNSHMNHQHHHQQQQQHQQQQHQLAH
gm042874_Glyma1 MQPCSKEMQGLNSLLNSSSQISLQDLQNHTTNQIQNSHMNH-------------QHQLAH
                *:  . * :*                                                 .

AT5G58010.1     FINQNNDFFLDSMSMLSSL---------PPCWDPSLPPPPPPPQS---------------
gm024559_Glyma0 FDSTSHDDFLE--QMLSSCSWTDLNHNKPLLWDPNTPNDIKPPDETTPSNNNDDATANVV
gm042874_Glyma1 FDSTSHDDFLE--QMLSSCSWTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVA
                * . .:* **:  .****          *  ***.      **:.               

AT5G58010.1     ------------------------------------LFHAL------------------A
gm024559_Glyma0 -FPSFDEHSTLASKFRNHQISP-NNAPKNAAAAAFMLQHQLLRDSGLLNMPLSLPGND-V
gm042874_Glyma1 SFSSFDEHSTLASKFRNHQISSNNNAPKNAAAAALMLQHQLLRDSGLLNMPLSLPGNDVV
                                                    * * *                  .

AT5G58010.1     VDA-----PFP---------------------------DQFHHPQESGGPTMGSQEGLQP
gm024559_Glyma0 VDASSFKSPNPGGEASVQALYNGFAGSLHGAGQSSNQTQHFQNPQGSSNPMQGQNFGAAP
gm042874_Glyma1 VDASTFESPNPSGKASVQTFYNGFAGSLHGVGQSSNQTQHFQHPQGSSNPMQGQNFGAVP
                ***     * *                           ::*::** *..*  *.: *  *

AT5G58010.1     QGTVSTTS-----------APVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQE
gm024559_Glyma0 AGGGGATNQAPGSGAAAGGAP-AQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQE
gm042874_Glyma1 AGGGSATNQAPASGAAAGGAP-AQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQE
                 *  .:*.           ** .: : *****************************:***

AT5G58010.1     LVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAGGRLNAL
gm024559_Glyma0 LVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMYSEGGGDCIQA
gm042874_Glyma1 LVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQA
                ****:*************:**:*****************.:*.* : .: :*.**     

AT5G58010.1     TAPCNG-------LNGNGN---ATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCL
gm024559_Glyma0 NGNSNGGGAHAP--NSNTNQTSATTPSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCL
gm042874_Glyma1 NGKSNGGGAQASTTNTNTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCL
                .. .**        * * *   ** .**:**  **::***********************

AT5G58010.1     MPISLATAISSSTTHSRG--SLFNPISSAVAAEDSNVTA-------------------TA
gm024559_Glyma0 MPISLATAISTATCHTRNVTVNVNPLINAAAAA-QIPTAANPAGDGPSSPSMSVLTVQSA
gm042874_Glyma1 MPISLATAISTATCPTRN--VNVNPLINAAAGATHFPTAANPAGEGPSSPSMSVLTVQSA
                **********::*  :*.    .**: .*.*.     **                   :*

AT5G58010.1     VAAPEASSTM-DDVSASKA
gm024559_Glyma0 VAVNDGSAAVKDAASVSKP
gm042874_Glyma1 IAGNDG------AASVSKP
                :*  :.       .*.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G58010.1     M E N G N G E G K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E
gm024559_Glyma0    M Q P C S R E M Q G L N S L L N S S S Q I S L Q D L H N H T T N Q I Q N S H M N H Q H H H Q Q Q Q Q H Q Q Q Q H Q L A H
gm042874_Glyma1    M Q P C S K E M Q G L N S L L N S S S Q I S L Q D L Q N H T T N Q I Q N S H M N H - - - - - - - - - - - - - Q H Q L A H
 
AT5G58010.1     F I N Q N N D F F L D S M S M L S S L - - - - - - - - - P P C W D P S L P P P P P P P Q S - - - - - - - - - - - - - - -
gm024559_Glyma0    F D S T S H D D F L E - - Q M L S S C S W T D L N H N K P L L W D P N T P N D I K P P D E T T P S N N N D D A T A N V V
gm042874_Glyma1    F D S T S H D D F L E - - Q M L S S C S W T D L N P N K P L L W D P N T L N D I K P P D E T T P S N N N N D A T T N V A
 
AT5G58010.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L F H A L - - - - - - - - - - - - - - - - - - A
gm024559_Glyma0    - F P S F D E H S T L A S K F R N H Q I S P - N N A P K N A A A A A F M L Q H Q L L R D S G L L N M P L S L P G N D - V
gm042874_Glyma1    S F S S F D E H S T L A S K F R N H Q I S S N N N A P K N A A A A A L M L Q H Q L L R D S G L L N M P L S L P G N D V V
 
AT5G58010.1     V D A - - - - - P F P - - - - - - - - - - - - - - - - - - - - - - - - - - - D Q F H H P Q E S G G P T M G S Q E G L Q P
gm024559_Glyma0    V D A S S F K S P N P G G E A S V Q A L Y N G F A G S L H G A G Q S S N Q T Q H F Q N P Q G S S N P M Q G Q N F G A A P
gm042874_Glyma1    V D A S T F E S P N P S G K A S V Q T F Y N G F A G S L H G V G Q S S N Q T Q H F Q H P Q G S S N P M Q G Q N F G A V P
 
AT5G58010.1     Q G T V S T T S - - - - - - - - - - - A P V V R Q K P R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K S L Q E
gm024559_Glyma0    A G G G G A T N Q A P G S G A A A G G A P - A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E
gm042874_Glyma1    A G G G S A T N Q A P A S G A A A G G A P - A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E
 
AT5G58010.1     L V P N T N K T D K A S M L D E I I E Y V R F L Q L Q V K V L S M S R L G G A G S V G P R L N G L S A E A G G R L N A L
gm024559_Glyma0    L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M Y S E G G G D C I Q A
gm042874_Glyma1    L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E G G G D C I Q A
 
AT5G58010.1     T A P C N G - - - - - - - L N G N G N - - - A T G S S N E S L R S T E Q R V A K L M E E D M G S A M Q Y L Q G K G L C L
gm024559_Glyma0    N G N S N G G G A H A P - - N S N T N Q T S A T T P S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L
gm042874_Glyma1    N G K S N G G G A Q A S T T N T N T N Q T T A T T T S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L
 
AT5G58010.1     M P I S L A T A I S S S T T H S R G - - S L F N P I S S A V A A E D S N V T A - - - - - - - - - - - - - - - - - - - T A
gm024559_Glyma0    M P I S L A T A I S T A T C H T R N V T V N V N P L I N A A A A A - Q I P T A A N P A G D G P S S P S M S V L T V Q S A
gm042874_Glyma1    M P I S L A T A I S T A T C P T R N - - V N V N P L I N A A A G A T H F P T A A N P A G E G P S S P S M S V L T V Q S A
 
AT5G58010.1     V A A P E A S S T M - D D V S A S K A
gm024559_Glyma0    V A V N D G S A A V K D A A S V S K P
gm042874_Glyma1    I A G N D G - - - - - - A A S V S K P
 
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