fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048860 not found in 339aa AT5G58850.1 1st_1st 0.308860759 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58850.1     MEDRRLVHGAAPPLTAVERFLYGQKNDALCSKKQESSRDQPIVKTKISIETRSDNKENTT
gm048860_Glyma1 --------------------MWPNNN----STTQEVSYAEQIIFA-------NNNEE---
                                    :: ::*    *..** *  : *: :       .:*:*   

AT5G58850.1     FGPTREKHLVLNGGNR---NPTGEVVARSAARDYQNSTKKRSSKNLIKGQWTAEEDRKLI
gm048860_Glyma1 ---------ALNWSQQVCFKEDGKNIAKVVGR----RPKKGSSVPLIKGQWTDEEDRKLL
                         .** .::   :  *: :*: ..*     .** **  ******* ******:

AT5G58850.1     RLVRQHGERKWAMISEKLEGRAGKQCRERWHNHLRPDIKKDGWSEEEERVLVESHMRIGN
gm048860_Glyma1 KLVKQHGVRKWSLIAEKLDGRAGKQCRERWHNHLRPDIKKDSWSEEEERILVETHAKIGN
                :**:*** ***::*:***:**********************.*******:***:* :***

AT5G58850.1     KWAEIAKLIPGRTENSIKNHWNATKRRQNSKRKHKRESNADNNDRDASPSAKRPCILQDY
gm048860_Glyma1 RWAEIAKCIPGRTENAIKNHWNATKRRQNSRRKNKRAGTSNGK--------PQPSILQDY
                :****** *******:**************:**:** ..::.:         :*.*****

AT5G58850.1     IKSIERNNINKDNDEKKNENTISVISTPNLDQIYSDGDSASSILGGPYDEELDYFQNIFA
gm048860_Glyma1 IKSL---TLITSTTTSPVEQQIA----PQLSNSVTNNEN-SSLMAESYDDELLFMQQLFK
                ***:   .: ...  .  *: *:    *:*.:  ::.:. **::. .**:** ::*::* 

AT5G58850.1     -NHPISLENL-------------------------GLSQTSDEVTQSSSSGFMIKNPNPN
gm048860_Glyma1 ENNANNVESLKHSKNIINNSSAASLDCYYHQTNYNGGGQLLTDVTQ---CGFVVHS-NPN
                 *:. .:*.*                         * .*   :***   .**:::. ***

AT5G58850.1     LHDSVGIHH------QEATITAPANTPH-----LASD-IYLSYLLNGTTSSYSDTHFPSS
gm048860_Glyma1 TTNS---HHNNMCLDESLFISRKSTTPHAPINYLDSDHVYLSHLLNGTA-----------
                  :*   **      :.  *:  :.***     * ** :***:*****:           

AT5G58850.1     SSSTSSTTVEHGGHNEFLEPQANSTSERREMDLIEMLSGSIQGSNICFPLV
gm048860_Glyma1 ---------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G58850.1     M E D R R L V H G A A P P L T A V E R F L Y G Q K N D A L C S K K Q E S S R D Q P I V K T K I S I E T R S D N K E N T T
gm048860_Glyma1    - - - - - - - - - - - - - - - - - - - - M W P N N N - - - - S T T Q E V S Y A E Q I I F A - - - - - - - N N N E E - - -
 
AT5G58850.1     F G P T R E K H L V L N G G N R - - - N P T G E V V A R S A A R D Y Q N S T K K R S S K N L I K G Q W T A E E D R K L I
gm048860_Glyma1    - - - - - - - - - A L N W S Q Q V C F K E D G K N I A K V V G R - - - - R P K K G S S V P L I K G Q W T D E E D R K L L
 
AT5G58850.1     R L V R Q H G E R K W A M I S E K L E G R A G K Q C R E R W H N H L R P D I K K D G W S E E E E R V L V E S H M R I G N
gm048860_Glyma1    K L V K Q H G V R K W S L I A E K L D G R A G K Q C R E R W H N H L R P D I K K D S W S E E E E R I L V E T H A K I G N
 
AT5G58850.1     K W A E I A K L I P G R T E N S I K N H W N A T K R R Q N S K R K H K R E S N A D N N D R D A S P S A K R P C I L Q D Y
gm048860_Glyma1    R W A E I A K C I P G R T E N A I K N H W N A T K R R Q N S R R K N K R A G T S N G K - - - - - - - - P Q P S I L Q D Y
 
AT5G58850.1     I K S I E R N N I N K D N D E K K N E N T I S V I S T P N L D Q I Y S D G D S A S S I L G G P Y D E E L D Y F Q N I F A
gm048860_Glyma1    I K S L - - - T L I T S T T T S P V E Q Q I A - - - - P Q L S N S V T N N E N - S S L M A E S Y D D E L L F M Q Q L F K
 
AT5G58850.1     - N H P I S L E N L - - - - - - - - - - - - - - - - - - - - - - - - - G L S Q T S D E V T Q S S S S G F M I K N P N P N
gm048860_Glyma1    E N N A N N V E S L K H S K N I I N N S S A A S L D C Y Y H Q T N Y N G G G Q L L T D V T Q - - - C G F V V H S - N P N
 
AT5G58850.1     L H D S V G I H H - - - - - - Q E A T I T A P A N T P H - - - - - L A S D - I Y L S Y L L N G T T S S Y S D T H F P S S
gm048860_Glyma1    T T N S - - - H H N N M C L D E S L F I S R K S T T P H A P I N Y L D S D H V Y L S H L L N G T A - - - - - - - - - - -
 
AT5G58850.1     S S S T S S T T V E H G G H N E F L E P Q A N S T S E R R E M D L I E M L S G S I Q G S N I C F P L V
gm048860_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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