fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029831 not found in 306aa AT2G38090.1 1st_not 0.536672629 II
Pt020982 not found in 308aa AT5G58900.1 not_1st 0.529516994 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G58900.1     ----MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDR
pt029831_POPTR_ MKWEMGILSPA-SYLSSTNWLLEESKN--------TKWTPAENKAFENALAVYDEDTPDR
pt020982_POPTR_ MKWETEILSPG-SYLSSSNWLAEESKN--------TKWTIAENKAFENALAIYDKETSDR
                      :: *. *::*. *** **:*.        :.** ***********:**.:*.**

AT5G58900.1     WQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGYITSPPFTLDWAGGGG-GCNG
pt029831_POPTR_ WHKVAAMIPGKTVGDVIKQYKELELDVSYIEAGLIPVPGYSTS-PFTLDWVDGN--GYDG
pt020982_POPTR_ WHKVAAMIPGKTVEDVIKQYKELELDVSYIEAGLIPVPGYSSS-PFTLDWVNGNGYGYDG
                *:****:****** ***:**::** *** *********** :* ******..*.  * :*

AT5G58900.1     FKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRT
pt029831_POPTR_ FKQSYGLGGKRSSTGRPADQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVSRT
pt020982_POPTR_ FKQSYGLGGKRSSTGRPTDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVISRT
                ** .: : .***.:**..: ************************************::**

AT5G58900.1     PTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLEE--EASLETNKSSIVVGDQRSRL-
pt029831_POPTR_ PTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLNDARTPSPDNKRPS---PDQPGAIS
pt020982_POPTR_ PTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLNETRTPSPDNKRTS---PDQSGAIS
                ***********************************::   .* :.::.*    ** . : 

AT5G58900.1     ----------TAFPWNQTDNNGTQADAFNITIGN----AISGVHSYGQVMIGGYNNADSC
pt029831_POPTR_ QQPNSAAMPRTHFQWNQPNGGGTL--AFNSTNANMFMSAPYGISSYGLKMQGQNLPRGAV
pt020982_POPTR_ QQPNSAAMPRTHFQWNQPNSGATM--AFNSTNANMFMSSPYGINSYGLKMQGQNPHRGAV
                          * * ***.:...*   *** * .*    :  *: ***  * *     .: 

AT5G58900.1     YDA---QNTM-FQL---------
pt029831_POPTR_ HDSYIRQQTMGFQMPSAHHYPHG
pt020982_POPTR_ HDSYIGQQTMGFQMQSAQHYPHG
                :*:   *:** **:
BoxShade v3.31 C (beta, 970507) Output
AT5G58900.1     - - - - M E V M R P S T S H V S G G N W L M E E T K S G V A A S G E G A T W T A A E N K A F E N A L A V Y D D N T P D R
pt029831_POPTR_    M K W E M G I L S P A - S Y L S S T N W L L E E S K N - - - - - - - - T K W T P A E N K A F E N A L A V Y D E D T P D R
pt020982_POPTR_    M K W E T E I L S P G - S Y L S S S N W L A E E S K N - - - - - - - - T K W T I A E N K A F E N A L A I Y D K E T S D R
 
AT5G58900.1     W Q K V A A V I P G K T V S D V I R Q Y N D L E A D V S S I E A G L I P V P G Y I T S P P F T L D W A G G G G - G C N G
pt029831_POPTR_    W H K V A A M I P G K T V G D V I K Q Y K E L E L D V S Y I E A G L I P V P G Y S T S - P F T L D W V D G N - - G Y D G
pt020982_POPTR_    W H K V A A M I P G K T V E D V I K Q Y K E L E L D V S Y I E A G L I P V P G Y S S S - P F T L D W V N G N G Y G Y D G
 
AT5G58900.1     F K P G H Q V C N K R S Q A G R S P E L E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V I T R T
pt029831_POPTR_    F K Q S Y G L G G K R S S T G R P A D Q E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V V S R T
pt020982_POPTR_    F K Q S Y G L G G K R S S T G R P T D Q E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V I S R T
 
AT5G58900.1     P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L E E - - E A S L E T N K S S I V V G D Q R S R L -
pt029831_POPTR_    P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L N D A R T P S P D N K R P S - - - P D Q P G A I S
pt020982_POPTR_    P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L N E T R T P S P D N K R T S - - - P D Q S G A I S
 
AT5G58900.1     - - - - - - - - - - T A F P W N Q T D N N G T Q A D A F N I T I G N - - - - A I S G V H S Y G Q V M I G G Y N N A D S C
pt029831_POPTR_    Q Q P N S A A M P R T H F Q W N Q P N G G G T L - - A F N S T N A N M F M S A P Y G I S S Y G L K M Q G Q N L P R G A V
pt020982_POPTR_    Q Q P N S A A M P R T H F Q W N Q P N S G A T M - - A F N S T N A N M F M S S P Y G I N S Y G L K M Q G Q N P H R G A V
 
AT5G58900.1     Y D A - - - Q N T M - F Q L - - - - - - - - -
pt029831_POPTR_    H D S Y I R Q Q T M G F Q M P S A H H Y P H G
pt020982_POPTR_    H D S Y I G Q Q T M G F Q M Q S A Q H Y P H G
 
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