fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026128 not found in 378aa AT5G58900.1 not_1st 0.407871198 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58900.1     MEVMRPSTSHVSGGNWLMEETKSGVAASG-------------------------------
Sb026128_Sorbi1 ---FSPSS--------FFAASQTAPAQVGRHAAAKMMAEAAWTPVLFPPTVPCFWQPDTH
                   : **:        ::  :::. *  *                               

AT5G58900.1     -----EGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS
Sb026128_Sorbi1 PVFWRRGDAWTAEENKKFEKALALIDRNAPDRWEKVAELLPRKTADDVRNHYHDLENDVG
                     .* :*** *** **:***: * *:****:*** ::* **..** .:*:*** **.

AT5G58900.1     SIEAGLIPVPGYITSPP---FTL-DWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKG
Sb026128_Sorbi1 YIEAGLVPFPHYSSSVPSSGFTLEDWDAYGGGGGGFRRG-GYCLKRS---RGSDQERKKG
                 *****:*.* * :* *   *** ** . *** .**: *   * ***   *..: *****

AT5G58900.1     VPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRA
Sb026128_Sorbi1 VPWTEEEHKLFLMGLKKYGRGDWRNISRKYVTTRTPTQVASHAQKYFIRLNSGGKDKRRS
                *******************:********::* *****************  ********:

AT5G58900.1     SIHDITTVNLEEEASLETNKSSIVVGDQRSRLTAFPWNQTDNNGTQADAFNITIGNAISG
Sb026128_Sorbi1 SIHDITTVNLPDE----------------DRGNATP----PSPPSAVTAANPSVAALVDV
                ********** :*                .* .* *     .  : . * * ::.  :. 

AT5G58900.1     VHSYGQVMIGGYNNADSCYDAQNTMFQL
Sb026128_Sorbi1 KPFMAPRMKSGTVSAFSCPSPRGSSE--
                    .  * .*  .* ** ..:.:
BoxShade v3.31 C (beta, 970507) Output
AT5G58900.1     M E V M R P S T S H V S G G N W L M E E T K S G V A A S G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026128_Sorbi1    - - - F S P S S - - - - - - - - F F A A S Q T A P A Q V G R H A A A K M M A E A A W T P V L F P P T V P C F W Q P D T H
 
AT5G58900.1     - - - - - E G A T W T A A E N K A F E N A L A V Y D D N T P D R W Q K V A A V I P G K T V S D V I R Q Y N D L E A D V S
Sb026128_Sorbi1    P V F W R R G D A W T A E E N K K F E K A L A L I D R N A P D R W E K V A E L L P R K T A D D V R N H Y H D L E N D V G
 
AT5G58900.1     S I E A G L I P V P G Y I T S P P - - - F T L - D W A G G G G G C N G F K P G H Q V C N K R S Q A G R S P E L E R K K G
Sb026128_Sorbi1    Y I E A G L V P F P H Y S S S V P S S G F T L E D W D A Y G G G G G G F R R G - G Y C L K R S - - - R G S D Q E R K K G
 
AT5G58900.1     V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V I T R T P T Q V A S H A Q K Y F I R Q L S G G K D K R R A
Sb026128_Sorbi1    V P W T E E E H K L F L M G L K K Y G R G D W R N I S R K Y V T T R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S
 
AT5G58900.1     S I H D I T T V N L E E E A S L E T N K S S I V V G D Q R S R L T A F P W N Q T D N N G T Q A D A F N I T I G N A I S G
Sb026128_Sorbi1    S I H D I T T V N L P D E - - - - - - - - - - - - - - - - D R G N A T P - - - - P S P P S A V T A A N P S V A A L V D V
 
AT5G58900.1     V H S Y G Q V M I G G Y N N A D S C Y D A Q N T M F Q L
Sb026128_Sorbi1    K P F M A P R M K S G T V S A F S C P S P R G S S E - -
 
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