fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032690 not found in 539aa AT5G58900.1 1st_1st 0.420393559 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58900.1     MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKV
Sb032690_Sorbi1 ---LKPTT-----------DTRNRLVRGQRREVFSSFCHCNF----CVKTSQSAERLQ-L
                   ::*:*           :*:. :. . .  .:::  :  *    .*  .::.:* * :

AT5G58900.1     AAVIPGKTVSDVIRQYNDLEADVSSIEAGL---IPVPG---------YITSPPFTLD---
Sb032690_Sorbi1 AAVHLHLHQNRVVQE----ASTVMGIDAGLELHVAVGGVRQEVVVVVVVRRRGLAVDEDA
                ***      . *:::     : * .*:***   :.* *          :    :::*   

AT5G58900.1     --------WAGGGG-GCNGFKPGHQVCNKRSQ----------------------------
Sb032690_Sorbi1 KLLGDDRAAAGGGGRGCGGGGGEHRHRGRRGRGVAAACGVVVGEVDGGDVVDAGAALVLA
                         ***** **.*    *:  .:*.:                            

AT5G58900.1     ------------AG----RSPELERKKGVP--------WTEEEHKLFLMGLKKYGKGDWR
Sb032690_Sorbi1 AGVEADEVLLRVAGHLRRRPASHEVARDVPPVPAPVLLQTHQEQLVLLL----------R
                            **    *... *  :.**         *.:*: ::*:          *

AT5G58900.1     NISRNFVITRTPTQVASHAQKYFI---------------RQLSGGKDKRRASI-------
Sb032690_Sorbi1 PGDALLALLVRPTALALAAANHVAGALKASVAGAGIPVEREPSG---LRRATAAAAVAGE
                  .  :.:   ** :*  * ::.                *: **    ***:        

AT5G58900.1     -HDITTVNLEE-EASLETNKSSIVVGDQ------------------------RSRLTAF-
Sb032690_Sorbi1 GHE---SGLDEADIALEV----IVVGDDVGHRPPRQQLGDPLPPIRRVGVDPRQRALEHL
                 *:    .*:* : :**.    *****:                        *.*   . 

AT5G58900.1     ------------PWNQTDNNGTQADAFNITIGNAISGVHSYGQVM---------------
Sb032690_Sorbi1 VLLHRPRPGPGPPVRRRRQEPPAARRLSREVGRR---QHLHPQLRHPRTNRPPRFLSPSL
                            * .:  :: . *  :.  :*.     * : *:                

AT5G58900.1     -IGGYNNADSCYDAQNTMFQL-----
Sb032690_Sorbi1 SLSESEDTDTEEGGETLVSQSARREG
                 :.  :::*:  ..:. : *
BoxShade v3.31 C (beta, 970507) Output
AT5G58900.1     M E V M R P S T S H V S G G N W L M E E T K S G V A A S G E G A T W T A A E N K A F E N A L A V Y D D N T P D R W Q K V
Sb032690_Sorbi1    - - - L K P T T - - - - - - - - - - - D T R N R L V R G Q R R E V F S S F C H C N F - - - - C V K T S Q S A E R L Q - L
 
AT5G58900.1     A A V I P G K T V S D V I R Q Y N D L E A D V S S I E A G L - - - I P V P G - - - - - - - - - Y I T S P P F T L D - - -
Sb032690_Sorbi1    A A V H L H L H Q N R V V Q E - - - - A S T V M G I D A G L E L H V A V G G V R Q E V V V V V V V R R R G L A V D E D A
 
AT5G58900.1     - - - - - - - - W A G G G G - G C N G F K P G H Q V C N K R S Q - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032690_Sorbi1    K L L G D D R A A A G G G G R G C G G G G G E H R H R G R R G R G V A A A C G V V V G E V D G G D V V D A G A A L V L A
 
AT5G58900.1     - - - - - - - - - - - - A G - - - - R S P E L E R K K G V P - - - - - - - - W T E E E H K L F L M G L K K Y G K G D W R
Sb032690_Sorbi1    A G V E A D E V L L R V A G H L R R R P A S H E V A R D V P P V P A P V L L Q T H Q E Q L V L L L - - - - - - - - - - R
 
AT5G58900.1     N I S R N F V I T R T P T Q V A S H A Q K Y F I - - - - - - - - - - - - - - - R Q L S G G K D K R R A S I - - - - - - -
Sb032690_Sorbi1    P G D A L L A L L V R P T A L A L A A A N H V A G A L K A S V A G A G I P V E R E P S G - - - L R R A T A A A A V A G E
 
AT5G58900.1     - H D I T T V N L E E - E A S L E T N K S S I V V G D Q - - - - - - - - - - - - - - - - - - - - - - - - R S R L T A F -
Sb032690_Sorbi1    G H E - - - S G L D E A D I A L E V - - - - I V V G D D V G H R P P R Q Q L G D P L P P I R R V G V D P R Q R A L E H L
 
AT5G58900.1     - - - - - - - - - - - - P W N Q T D N N G T Q A D A F N I T I G N A I S G V H S Y G Q V M - - - - - - - - - - - - - - -
Sb032690_Sorbi1    V L L H R P R P G P G P P V R R R R Q E P P A A R R L S R E V G R R - - - Q H L H P Q L R H P R T N R P P R F L S P S L
 
AT5G58900.1     - I G G Y N N A D S C Y D A Q N T M F Q L - - - - -
Sb032690_Sorbi1    S L S E S E D T D T E E G G E T L V S Q S A R R E G
 
0