fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031376 not found in 323aa AT5G58900.1 not_1st 0.515205724 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58900.1     ----MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDR
gm031376_Glyma1 MKWEMEILPPASPYTYNSNWLLDDNR-----TNNNTKWTPAENKLFENALAVYDKDTPDR
                    **:: *::.:. ..***:::.:     :.:.:.**.**** *********.:****

AT5G58900.1     WQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGY---ITSPPFTLDWAGGGGGC
gm031376_Glyma1 WHKVAEMIPGKTVMDVVKQYKELEADVCDIEAGLISIPGYRSTTTTSPFTLDWVNPAYG-
                *:*** :****** **::**::*****..******.:***    *:.******.. . * 

AT5G58900.1     NGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVIT
gm031376_Glyma1 DGFK---GLTAKRSSSGRPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNYVIT
                :***    :  ***.:**.** *****************:****************:***

AT5G58900.1     RTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLEEEASLETNKSSIVVGDQRSRLT
gm031376_Glyma1 RTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTRTSSDESKRSTSPQHSTIL
                ************************************* * :  .:::*.  .. *:* : 

AT5G58900.1     AFPWNQTD--NNGTQADAFNITIGNAIS-------------------GVHSYGQVMIGGY
gm031376_Glyma1 SHQQQQQQQPNSSVASSGLNLQWSNQPNAGVAMPLNPAHEQVFMSPYGLNSYGFKMHGQN
                :.  :* :  *... :..:*:  .*  .                   *::***  * *  

AT5G58900.1     NNADSCYDAQ-------NTMFQL---------
gm031376_Glyma1 LHRSSVHESSYLGPQTPNMVFQMLPSQHYSHA
                 : .* :::.       * :**:
BoxShade v3.31 C (beta, 970507) Output
AT5G58900.1     - - - - M E V M R P S T S H V S G G N W L M E E T K S G V A A S G E G A T W T A A E N K A F E N A L A V Y D D N T P D R
gm031376_Glyma1    M K W E M E I L P P A S P Y T Y N S N W L L D D N R - - - - - T N N N T K W T P A E N K L F E N A L A V Y D K D T P D R
 
AT5G58900.1     W Q K V A A V I P G K T V S D V I R Q Y N D L E A D V S S I E A G L I P V P G Y - - - I T S P P F T L D W A G G G G G C
gm031376_Glyma1    W H K V A E M I P G K T V M D V V K Q Y K E L E A D V C D I E A G L I S I P G Y R S T T T T S P F T L D W V N P A Y G -
 
AT5G58900.1     N G F K P G H Q V C N K R S Q A G R S P E L E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V I T
gm031376_Glyma1    D G F K - - - G L T A K R S S S G R P P E Q E R K K G V P W T E E E H K L F L L G L K K Y G K G D W R N I S R N Y V I T
 
AT5G58900.1     R T P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L E E E A S L E T N K S S I V V G D Q R S R L T
gm031376_Glyma1    R T P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L T E T T R T S S D E S K R S T S P Q H S T I L
 
AT5G58900.1     A F P W N Q T D - - N N G T Q A D A F N I T I G N A I S - - - - - - - - - - - - - - - - - - - G V H S Y G Q V M I G G Y
gm031376_Glyma1    S H Q Q Q Q Q Q Q P N S S V A S S G L N L Q W S N Q P N A G V A M P L N P A H E Q V F M S P Y G L N S Y G F K M H G Q N
 
AT5G58900.1     N N A D S C Y D A Q - - - - - - - N T M F Q L - - - - - - - - -
gm031376_Glyma1    L H R S S V H E S S Y L G P Q T P N M V F Q M L P S Q H Y S H A
 
0