fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G58900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm048851 not found in 321aa AT5G58900.1 1st_1st 0.515205724 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G58900.1     ----MEVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDR
gm048851_Glyma1 MKWEMEILPPASPYMYNSNWLLDDNRT------NNTKWTPAENKLFENALAVYDRDTPDR
                    **:: *::.:: ..***:::.::      :.:.**.**** ********* :****

AT5G58900.1     WQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGY----ITSPPFTLDWAGGGGG
gm048851_Glyma1 WHKVAEMIPGKTVMDVVKQYKELEADVCDIEAGLIPIPGYSSGTTTTSPFTLDWVNTSPA
                *:*** :****** **::**::*****..*******:***     *:.******.. . .

AT5G58900.1     C-NGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFV
gm048851_Glyma1 YDDGFK---GITAKRSSSGRPLEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNYV
                  :***    :  ***.:**. * *****************:****************:*

AT5G58900.1     ITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLEEEASLETNKSSIVVGDQRSR
gm048851_Glyma1 ITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTRTSSDESKRSASPQNSA
                *************************************** * :  .:::*.  .. *.* 

AT5G58900.1     LTA---------------FPWNQTDNNGTQADAFNIT---IGNAISGVHSYGQVMIGGYN
gm048851_Glyma1 MLSRHQQLNSNAASSGLNFQWSDQPNAGV-AMALNPAHEQVFMSPYGLNSYGFKMQGQNL
                : :               * *.:  * *. * *:* :   :  :  *::***  * *   

AT5G58900.1     NADSCYDAQ-------NTMFQL---------
gm048851_Glyma1 HRSSLHESSYLGPQTPNMVFQMQPSQHYSHA
                : .* :::.       * :**:
BoxShade v3.31 C (beta, 970507) Output
AT5G58900.1     - - - - M E V M R P S T S H V S G G N W L M E E T K S G V A A S G E G A T W T A A E N K A F E N A L A V Y D D N T P D R
gm048851_Glyma1    M K W E M E I L P P A S P Y M Y N S N W L L D D N R T - - - - - - N N T K W T P A E N K L F E N A L A V Y D R D T P D R
 
AT5G58900.1     W Q K V A A V I P G K T V S D V I R Q Y N D L E A D V S S I E A G L I P V P G Y - - - - I T S P P F T L D W A G G G G G
gm048851_Glyma1    W H K V A E M I P G K T V M D V V K Q Y K E L E A D V C D I E A G L I P I P G Y S S G T T T T S P F T L D W V N T S P A
 
AT5G58900.1     C - N G F K P G H Q V C N K R S Q A G R S P E L E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V
gm048851_Glyma1    Y D D G F K - - - G I T A K R S S S G R P L E Q E R K K G V P W T E E E H K L F L L G L K K Y G K G D W R N I S R N Y V
 
AT5G58900.1     I T R T P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L E E E A S L E T N K S S I V V G D Q R S R
gm048851_Glyma1    I T R T P T Q V A S H A Q K Y F I R Q L S G G K D K R R A S I H D I T T V N L T E T T R T S S D E S K R S A S P Q N S A
 
AT5G58900.1     L T A - - - - - - - - - - - - - - - F P W N Q T D N N G T Q A D A F N I T - - - I G N A I S G V H S Y G Q V M I G G Y N
gm048851_Glyma1    M L S R H Q Q L N S N A A S S G L N F Q W S D Q P N A G V - A M A L N P A H E Q V F M S P Y G L N S Y G F K M Q G Q N L
 
AT5G58900.1     N A D S C Y D A Q - - - - - - - N T M F Q L - - - - - - - - -
gm048851_Glyma1    H R S S L H E S S Y L G P Q T P N M V F Q M Q P S Q H Y S H A
 
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