fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030852 not found in 323aa AT3G46640.2 1st_not 0.436830835 II
Pt021163 not found in 349aa AT3G46640.2 1st_not 0.462526766 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59570.1     MGKEVMVSDYGDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPE
pt021163_POPTR_ MGEEVKMSEYEINDGEENINGDDERVAVWEIGLPTPDDLTPLSQTLIPPELASAFSIFPE
gm030852_Glyma1 MGEEVKTSEY-----------DEERVMEWEAGLPTANDLTPLSQPLIPPELASAFSILPE
                **:**  *:*           *: *:  ** ***. :******* *:*. ** ***::**

AT5G59570.1     RSRTIHDVNRASQITLSSLR----------SSTN---------------------ASSVM
pt021163_POPTR_ PHRTPLDVNRACQTTLSNLRGQ----LNALSSINFKSFNETTGQTHDPIVVDLDNKTGAV
gm030852_Glyma1 PHRTLLDVNRASRNTLSTLRGGGGSVHQAFSSSN---------NNHN---YDGDGDGGVE
                  **  *****.: ***.**          ** *                       .. 

AT5G59570.1     EEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPED---ASGKT-SKRPRLV
pt021163_POPTR_ -------DRDGSGSEARKLRRVD-----SEEEDSALRTDNSAEDPSSAAART-LKRPRLV
gm030852_Glyma1 EEEDDDDDRDGSGPDSRKQRKIDCG--AAEEADSAVQTETSAE-------RTAVKRPRLV
                       : . .*.:.:* :: *     : * .:* . :...*       :*  ******

AT5G59570.1     WTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTE
pt021163_POPTR_ WTPQLHKRFVDVVSHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSS-
gm030852_Glyma1 WTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSN-
                *************:***************************************:***:. 

AT5G59570.1     EDPYSSSDQLFSSTPVPPQSFQD------------------------GGGSNGKLGVP-V
pt021163_POPTR_ EGP-SASDQLFASTPL-PQSFPESS--------------------DGGGGGNGNFGIP-I
gm030852_Glyma1 EGP-SASDQLFASTPV-PQSLHDSAPPSNHSNGHGHGHGHSNGRGHGHGHGHGHLSVPMM
                *.* *:*****:***: ***: :                         * .:*::.:* :

AT5G59570.1     PVPS--------MVPIPG---------YGNQMGMQG---------------YYQ-QYSNH
pt021163_POPTR_ PMPYHHPATAGGMMPMPV---------YGH-MGMQMGNNNGHNNNSSDNHQHHQVSINGH
gm030852_Glyma1 SMPYPPP-----LMSMPYPPPMMSGMPHGH-MGIPM-------PNSSATSAYHP------
                .:*         ::.:*          :*: **:                 ::       

AT5G59570.1     GNESN-----QYMMQQNKF-----GTMVTYPS-VGGGDVNDK-
pt021163_POPTR_ QNGYNGNVVHGHMFQQRDWNGNHYGSYTHHPHQVAP---NDNM
gm030852_Glyma1 ---YN-------MLHQRDW-----------PH-LAP---NDK-
                    *       *::*..:           *  :.    **:
BoxShade v3.31 C (beta, 970507) Output
AT5G59570.1     M G K E V M V S D Y G D D D G E D A G G G D E Y R I P E W E I G L P N G D D L T P L S Q Y L V P S I L A L A F S M I P E
pt021163_POPTR_    M G E E V K M S E Y E I N D G E E N I N G D D E R V A V W E I G L P T P D D L T P L S Q T L I P P E L A S A F S I F P E
gm030852_Glyma1    M G E E V K T S E Y - - - - - - - - - - - D E E R V M E W E A G L P T A N D L T P L S Q P L I P P E L A S A F S I L P E
 
AT5G59570.1     R S R T I H D V N R A S Q I T L S S L R - - - - - - - - - - S S T N - - - - - - - - - - - - - - - - - - - - - A S S V M
pt021163_POPTR_    P H R T P L D V N R A C Q T T L S N L R G Q - - - - L N A L S S I N F K S F N E T T G Q T H D P I V V D L D N K T G A V
gm030852_Glyma1    P H R T L L D V N R A S R N T L S T L R G G G G S V H Q A F S S S N - - - - - - - - - N N H N - - - Y D G D G D G G V E
 
AT5G59570.1     E E V V D R V E S S V P G S D P K K Q K K S D G G E A A A V E D S T A E E G D S G P E D - - - A S G K T - S K R P R L V
pt021163_POPTR_    - - - - - - - D R D G S G S E A R K L R R V D - - - - - S E E E D S A L R T D N S A E D P S S A A A R T - L K R P R L V
gm030852_Glyma1    E E E D D D D D R D G S G P D S R K Q R K I D C G - - A A E E A D S A V Q T E T S A E - - - - - - - R T A V K R P R L V
 
AT5G59570.1     W T P Q L H K R F V D V V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R I Q G L T T E
pt021163_POPTR_    W T P Q L H K R F V D V V S H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S -
gm030852_Glyma1    W T P Q L H K R F V D V V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N -
 
AT5G59570.1     E D P Y S S S D Q L F S S T P V P P Q S F Q D - - - - - - - - - - - - - - - - - - - - - - - - G G G S N G K L G V P - V
pt021163_POPTR_    E G P - S A S D Q L F A S T P L - P Q S F P E S S - - - - - - - - - - - - - - - - - - - - D G G G G G N G N F G I P - I
gm030852_Glyma1    E G P - S A S D Q L F A S T P V - P Q S L H D S A P P S N H S N G H G H G H G H S N G R G H G H G H G H G H L S V P M M
 
AT5G59570.1     P V P S - - - - - - - - M V P I P G - - - - - - - - - Y G N Q M G M Q G - - - - - - - - - - - - - - - Y Y Q - Q Y S N H
pt021163_POPTR_    P M P Y H H P A T A G G M M P M P V - - - - - - - - - Y G H - M G M Q M G N N N G H N N N S S D N H Q H H Q V S I N G H
gm030852_Glyma1    S M P Y P P P - - - - - L M S M P Y P P P M M S G M P H G H - M G I P M - - - - - - - P N S S A T S A Y H P - - - - - -
 
AT5G59570.1     G N E S N - - - - - Q Y M M Q Q N K F - - - - - G T M V T Y P S - V G G G D V N D K -
pt021163_POPTR_    Q N G Y N G N V V H G H M F Q Q R D W N G N H Y G S Y T H H P H Q V A P - - - N D N M
gm030852_Glyma1    - - - Y N - - - - - - - M L H Q R D W - - - - - - - - - - - P H - L A P - - - N D K -
 
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