fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021163 not found in 349aa AT3G46640.2 1st_not 0.462526766 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59570.1     MGKEVMVSDYGDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPE
pt021163_POPTR_ MGEEVKMSEYEINDGEENINGDDERVAVWEIGLPTPDDLTPLSQTLIPPELASAFSIFPE
                **:** :*:*  :***:  .**: *:. ******. ******** *:*. ** ***::**

AT5G59570.1     RSRTIHDVNRASQITLSSLR------SSTNASSVMEE--------VVD------RVESSV
pt021163_POPTR_ PHRTPLDVNRACQTTLSNLRGQLNALSSINFKSFNETTGQTHDPIVVDLDNKTGAVDRDG
                  **  *****.* ***.**      ** * .*. *         ***       *: . 

AT5G59570.1     PGSDPKKQKKSDGGE--AAAVEDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVV
pt021163_POPTR_ SGSEARKLRRVDSEEEDSALRTDNSAED----PSSAAARTLKRPRLVWTPQLHKRFVDVV
                .**:.:* :: *. *  :*   *.:**:    *..*:.:* *******************

AT5G59570.1     AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSS
pt021163_POPTR_ SHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSS-EGP-SASDQLFAS
                :***************************************:***:: *.* *:*****:*

AT5G59570.1     TPVP---PQSFQDGGGSNGKLGVPVPVP--------SMVPIPGYGNQMGMQ-----GYYQ
pt021163_POPTR_ TPLPQSFPESSDGGGGGNGNFGIPIPMPYHHPATAGGMMPMPVYGH-MGMQMGNNNGHNN
                **:*   *:* :.***.**::*:*:*:*        .*:*:* **: ****     *: :

AT5G59570.1     QYS-NH---------------GNESNQYMMQQ-----NKFGTMVTYPSVGGGDVNDK-
pt021163_POPTR_ NSSDNHQHHQVSINGHQNGYNGNVVHGHMFQQRDWNGNHYGSYTHHPHQVAP--NDNM
                : * **               **  : :*:**     *::*: . :*   .   **:
BoxShade v3.31 C (beta, 970507) Output
AT5G59570.1     M G K E V M V S D Y G D D D G E D A G G G D E Y R I P E W E I G L P N G D D L T P L S Q Y L V P S I L A L A F S M I P E
pt021163_POPTR_    M G E E V K M S E Y E I N D G E E N I N G D D E R V A V W E I G L P T P D D L T P L S Q T L I P P E L A S A F S I F P E
 
AT5G59570.1     R S R T I H D V N R A S Q I T L S S L R - - - - - - S S T N A S S V M E E - - - - - - - - V V D - - - - - - R V E S S V
pt021163_POPTR_    P H R T P L D V N R A C Q T T L S N L R G Q L N A L S S I N F K S F N E T T G Q T H D P I V V D L D N K T G A V D R D G
 
AT5G59570.1     P G S D P K K Q K K S D G G E - - A A A V E D S T A E E G D S G P E D A S G K T S K R P R L V W T P Q L H K R F V D V V
pt021163_POPTR_    S G S E A R K L R R V D S E E E D S A L R T D N S A E D - - - - P S S A A A R T L K R P R L V W T P Q L H K R F V D V V
 
AT5G59570.1     A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R I Q G L T T E E D P Y S S S D Q L F S S
pt021163_POPTR_    S H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S - E G P - S A S D Q L F A S
 
AT5G59570.1     T P V P - - - P Q S F Q D G G G S N G K L G V P V P V P - - - - - - - - S M V P I P G Y G N Q M G M Q - - - - - G Y Y Q
pt021163_POPTR_    T P L P Q S F P E S S D G G G G G N G N F G I P I P M P Y H H P A T A G G M M P M P V Y G H - M G M Q M G N N N G H N N
 
AT5G59570.1     Q Y S - N H - - - - - - - - - - - - - - - G N E S N Q Y M M Q Q - - - - - N K F G T M V T Y P S V G G G D V N D K -
pt021163_POPTR_    N S S D N H Q H H Q V S I N G H Q N G Y N G N V V H G H M F Q Q R D W N G N H Y G S Y T H H P H Q V A P - - N D N M
 
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