fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021164 not found in 321aa AT3G46640.2 not_not 0.443254817 III
Pt031754 not found in 306aa AT3G46640.2 not_not 0.415417558 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59570.1     MGKEVMVSDYGDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPE
pt031754_POPTR_ ------MSEYEIND-EDNINRDDERIDVWEMGLPTPYDLTPLSQLLIPPELASAFNISPE
pt021164_POPTR_ MGEEVKMSEYEINDGEENINGDDERVAVWEIGLPTPDDLTPLSQTLIPPELASAFSIFPE
                      :*:*  :* *:  . *: *:  **:***.  ******* *:*. ** **.: **

AT5G59570.1     RSRTIHDVNRASQITLSSLRSSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGEAA-AV
pt031754_POPTR_ PHRTPLDVNRASQNTLSNLHGHLNALS--------------SNNFKSFNETTEADSALRT
pt021164_POPTR_ PHRTPLDVNRACQTTLSNLRGQLNALS--------------SINFKSFNETTG-----QT
                  **  *****.* ***.*:.  ** *              . : *. :::        .

AT5G59570.1     EDSTAEEGD--------SGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTI
pt031754_POPTR_ ENWV-------------DDPSSAAARTLKRPRLVWTPQLHKRFVDVVGHLGMKNAVPKTI
pt021164_POPTR_ HDPIVVDLDNKTGAVDRDGSGSEARKTLKRPRLVWTPQLHKRFVDVVSHLGIKNAVPKTI
                .:               ... . : :* *******************.***:********

AT5G59570.1     MQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSSTPVPPQSFQ----
pt031754_POPTR_ MQWMNVEGLTRENVASHLQKYRLYLKRKQGLSS-EGP-SASDQLFASTPV-PQSLHESG-
pt021164_POPTR_ MQLMNVEGLTRENVASHLQKYRLYLKRMQGLSS-EGP-SASDQLFASTPL-PQSFPESSD
                ** ************************ ***:: *.* *:*****:***: ***:     

AT5G59570.1     DGGGSNGKLGVPVPVP---------SMVPIPGYGNQMGMQGYYQQYSNHGNESNQYMMQQ
pt031754_POPTR_ GGSCGGGNFGMPIPMPYHHPATTAGGMMPMPVYGH-MGIQMVNDHVHNN-NNSNNYQHQQ
pt021164_POPTR_ GGGGGNGNFGIPIPMPYHHPA-TAGGMMPMPVYGH-MGMQMGNNNGHNN-NSSDNHQHHQ
                .*. ..*::*:*:*:*         .*:*:* **: **:*   ::  *: *.*:::  :*

AT5G59570.1     ---------------------------NKFGTMVTYPSVGGGDVNDK-
pt031754_POPTR_ VSMNSHQNGYNGNVALLMGNKHRDWNGTNYGPYSHHPHHAVS--NDNM
pt021164_POPTR_ VSINGHQNGYNGNVVHGHMFQQRDWNGNHYGSYTHHPHQVAP--NDNM
                                           .::*.   :*       **:
BoxShade v3.31 C (beta, 970507) Output
AT5G59570.1     M G K E V M V S D Y G D D D G E D A G G G D E Y R I P E W E I G L P N G D D L T P L S Q Y L V P S I L A L A F S M I P E
pt031754_POPTR_    - - - - - - M S E Y E I N D - E D N I N R D D E R I D V W E M G L P T P Y D L T P L S Q L L I P P E L A S A F N I S P E
pt021164_POPTR_    M G E E V K M S E Y E I N D G E E N I N G D D E R V A V W E I G L P T P D D L T P L S Q T L I P P E L A S A F S I F P E
 
AT5G59570.1     R S R T I H D V N R A S Q I T L S S L R S S T N A S S V M E E V V D R V E S S V P G S D P K K Q K K S D G G E A A - A V
pt031754_POPTR_    P H R T P L D V N R A S Q N T L S N L H G H L N A L S - - - - - - - - - - - - - - S N N F K S F N E T T E A D S A L R T
pt021164_POPTR_    P H R T P L D V N R A C Q T T L S N L R G Q L N A L S - - - - - - - - - - - - - - S I N F K S F N E T T G - - - - - Q T
 
AT5G59570.1     E D S T A E E G D - - - - - - - - S G P E D A S G K T S K R P R L V W T P Q L H K R F V D V V A H L G I K N A V P K T I
pt031754_POPTR_    E N W V - - - - - - - - - - - - - D D P S S A A A R T L K R P R L V W T P Q L H K R F V D V V G H L G M K N A V P K T I
pt021164_POPTR_    H D P I V V D L D N K T G A V D R D G S G S E A R K T L K R P R L V W T P Q L H K R F V D V V S H L G I K N A V P K T I
 
AT5G59570.1     M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R I Q G L T T E E D P Y S S S D Q L F S S T P V P P Q S F Q - - - -
pt031754_POPTR_    M Q W M N V E G L T R E N V A S H L Q K Y R L Y L K R K Q G L S S - E G P - S A S D Q L F A S T P V - P Q S L H E S G -
pt021164_POPTR_    M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S - E G P - S A S D Q L F A S T P L - P Q S F P E S S D
 
AT5G59570.1     D G G G S N G K L G V P V P V P - - - - - - - - - S M V P I P G Y G N Q M G M Q G Y Y Q Q Y S N H G N E S N Q Y M M Q Q
pt031754_POPTR_    G G S C G G G N F G M P I P M P Y H H P A T T A G G M M P M P V Y G H - M G I Q M V N D H V H N N - N N S N N Y Q H Q Q
pt021164_POPTR_    G G G G G N G N F G I P I P M P Y H H P A - T A G G M M P M P V Y G H - M G M Q M G N N N G H N N - N S S D N H Q H H Q
 
AT5G59570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - N K F G T M V T Y P S V G G G D V N D K -
pt031754_POPTR_    V S M N S H Q N G Y N G N V A L L M G N K H R D W N G T N Y G P Y S H H P H H A V S - - N D N M
pt021164_POPTR_    V S I N G H Q N G Y N G N V V H G H M F Q Q R D W N G N H Y G S Y T H H P H Q V A P - - N D N M
 
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