fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030852 not found in 323aa AT3G46640.2 1st_not 0.436830835 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59570.1     MGKEVMVSDYGDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPE
gm030852_Glyma1 MGEEVKTSEY-----------DEERVMEWEAGLPTANDLTPLSQPLIPPELASAFSILPE
                **:** .*:*           ** *: *** ***..:******* *:*. ** ***::**

AT5G59570.1     RSRTIHDVNRASQITLSSLR----------SSTNAS---------SVMEEVVDRVESSVP
gm030852_Glyma1 PHRTLLDVNRASRNTLSTLRGGGGSVHQAFSSSNNNHNYDGDGDGGVEEEEDDDDDRDGS
                  **: ******: ***:**          **:* .         .* **  *  : . .

AT5G59570.1     GSDPKKQKKSDGGEAAAVEDSTAEEGDSG--PEDASGKTS-KRPRLVWTPQLHKRFVDVV
gm030852_Glyma1 GPDSRKQRKIDCG--------AAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVV
                *.*.:**:* * *        :***.**.  .* :: :*: *******************

AT5G59570.1     AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSS
gm030852_Glyma1 AHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSN-EGP-SASDQLFAS
                ****************************************:***:. *.* *:*****:*

AT5G59570.1     TPVPPQSFQDG--------------GGSNGK---------------LGVPVPVPSM-VPI
gm030852_Glyma1 TPV-PQSLHDSAPPSNHSNGHGHGHGHSNGRGHGHGHGHGHLSVPMMSMPYPPPLMSMPY
                *** ***::*.              * ***:               :.:* * * * :* 

AT5G59570.1     PG---YGNQMGMQGYYQQYSNHGNESNQYMMQQNKFGTMVTYPSVGGGDVNDK
gm030852_Glyma1 PPPMMSGMPHGHMGIPMPNSSATSAYHPYNMLHQR-----DWPHLAP---NDK
                *     *   *  *     *.  .  : * * :::      :* :.    ***
BoxShade v3.31 C (beta, 970507) Output
AT5G59570.1     M G K E V M V S D Y G D D D G E D A G G G D E Y R I P E W E I G L P N G D D L T P L S Q Y L V P S I L A L A F S M I P E
gm030852_Glyma1    M G E E V K T S E Y - - - - - - - - - - - D E E R V M E W E A G L P T A N D L T P L S Q P L I P P E L A S A F S I L P E
 
AT5G59570.1     R S R T I H D V N R A S Q I T L S S L R - - - - - - - - - - S S T N A S - - - - - - - - - S V M E E V V D R V E S S V P
gm030852_Glyma1    P H R T L L D V N R A S R N T L S T L R G G G G S V H Q A F S S S N N N H N Y D G D G D G G V E E E E D D D D D R D G S
 
AT5G59570.1     G S D P K K Q K K S D G G E A A A V E D S T A E E G D S G - - P E D A S G K T S - K R P R L V W T P Q L H K R F V D V V
gm030852_Glyma1    G P D S R K Q R K I D C G - - - - - - - - A A E E A D S A V Q T E T S A E R T A V K R P R L V W T P Q L H K R F V D V V
 
AT5G59570.1     A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R I Q G L T T E E D P Y S S S D Q L F S S
gm030852_Glyma1    A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N - E G P - S A S D Q L F A S
 
AT5G59570.1     T P V P P Q S F Q D G - - - - - - - - - - - - - - G G S N G K - - - - - - - - - - - - - - - L G V P V P V P S M - V P I
gm030852_Glyma1    T P V - P Q S L H D S A P P S N H S N G H G H G H G H S N G R G H G H G H G H G H L S V P M M S M P Y P P P L M S M P Y
 
AT5G59570.1     P G - - - Y G N Q M G M Q G Y Y Q Q Y S N H G N E S N Q Y M M Q Q N K F G T M V T Y P S V G G G D V N D K
gm030852_Glyma1    P P P M M S G M P H G H M G I P M P N S S A T S A Y H P Y N M L H Q R - - - - - D W P H L A P - - - N D K
 
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