fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030851 not found in 323aa AT3G46640.2 not_not 0.436830835 III
Gm032903 not found in 306aa AT3G46640.2 not_not 0.436830835 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59570.1     MGKEVMVSDYGDDDGEDAGGGDEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPE
gm030851_Glyma1 MGEEVKTSEY-----------DEERVMEWEAGLPTANDLTPLSQPLIPPELASAFSILPE
gm032903_Glyma1 MGEEVKTSEY-----------DEERVMEWEMGLPTANDLTPLSQPLIPPELASAFSISPE
                **:** .*:*           ** *: *** ***..:******* *:*. ** ***: **

AT5G59570.1     RSRTIHDVNRASQITLSSLR----------SS-TNAS---------SVMEEVVDRVESSV
gm030851_Glyma1 PHRTLLDVNRASRNTLSTLRGGGGSVHQAFSS-SNNNHNYDGDGDGGVEEEEDDDDDRDG
gm032903_Glyma1 PHRTLLEVNRASRNTLSTIR-GGGSVHQAFSSNNNNNHHYDGDGDGG-DEEEYDDADRDG
                  **: :*****: ***::*          ** .* .         .  **  *  : . 

AT5G59570.1     PGSDPKKQKKSDGGEAAAVEDSTAEEGDSG--PEDASGKTS-KRPRLVWTPQLHKRFVDV
gm030851_Glyma1 SGPDSRKQRKIDCG--------AAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDV
gm032903_Glyma1 SGSDSRKQRKIDCG--------VAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVDV
                .*.*.:**:* * *        .***.**.  .* :: :*: ******************

AT5G59570.1     VAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFS
gm030851_Glyma1 VAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSN-EGP-SASDQLFA
gm032903_Glyma1 VAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSN-EGP-SSSDQLFA
                *****************************************:***:. *.* *:*****:

AT5G59570.1     STPVPPQSFQDG------------------------GGSNGKLGVPV-------------
gm030851_Glyma1 STPV-PQSLHDSAPPSNHSNGHGHGHGHSNGRGHGHGHGHGHLSVPMMSMPYPPPLMSMP
gm032903_Glyma1 STAV-PQSLHDSAPPSAHSN------------------GHGHLPVPMMSMPYPPPMMSMP
                **.* ***::*.                          .:*:* **:             

AT5G59570.1     -PVPSMVPIPGYGNQMGM-------QGYYQQYSNHGNESNQYMMQQNKFGTMVTYPSVGG
gm030851_Glyma1 YPPPMMSGMP--HGHMGIPMPNSSATSAYHPYN---------MLHQRD------WPHLAP
gm032903_Glyma1 YPPPMMSGMPHAHGHMGIPMPNSSATSAYHPYN---------MLHQRD------WPHLAP
                 * * *  :*   .:**:        . *: *.         *::*..      :* :. 

AT5G59570.1     GDVNDK
gm030851_Glyma1 ---NDK
gm032903_Glyma1 ---NDK
                   ***
BoxShade v3.31 C (beta, 970507) Output
AT5G59570.1     M G K E V M V S D Y G D D D G E D A G G G D E Y R I P E W E I G L P N G D D L T P L S Q Y L V P S I L A L A F S M I P E
gm030851_Glyma1    M G E E V K T S E Y - - - - - - - - - - - D E E R V M E W E A G L P T A N D L T P L S Q P L I P P E L A S A F S I L P E
gm032903_Glyma1    M G E E V K T S E Y - - - - - - - - - - - D E E R V M E W E M G L P T A N D L T P L S Q P L I P P E L A S A F S I S P E
 
AT5G59570.1     R S R T I H D V N R A S Q I T L S S L R - - - - - - - - - - S S - T N A S - - - - - - - - - S V M E E V V D R V E S S V
gm030851_Glyma1    P H R T L L D V N R A S R N T L S T L R G G G G S V H Q A F S S - S N N N H N Y D G D G D G G V E E E E D D D D D R D G
gm032903_Glyma1    P H R T L L E V N R A S R N T L S T I R - G G G S V H Q A F S S N N N N N H H Y D G D G D G G - D E E E Y D D A D R D G
 
AT5G59570.1     P G S D P K K Q K K S D G G E A A A V E D S T A E E G D S G - - P E D A S G K T S - K R P R L V W T P Q L H K R F V D V
gm030851_Glyma1    S G P D S R K Q R K I D C G - - - - - - - - A A E E A D S A V Q T E T S A E R T A V K R P R L V W T P Q L H K R F V D V
gm032903_Glyma1    S G S D S R K Q R K I D C G - - - - - - - - V A E E A D S A V R T E T S A E R T A V K R P R L V W T P Q L H K R F V D V
 
AT5G59570.1     V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R I Q G L T T E E D P Y S S S D Q L F S
gm030851_Glyma1    V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N - E G P - S A S D Q L F A
gm032903_Glyma1    V A H L G I K N A V P K T I M Q L M N V E G L T R E N V A S H L Q K Y R L Y L K R M Q G L S N - E G P - S S S D Q L F A
 
AT5G59570.1     S T P V P P Q S F Q D G - - - - - - - - - - - - - - - - - - - - - - - - G G S N G K L G V P V - - - - - - - - - - - - -
gm030851_Glyma1    S T P V - P Q S L H D S A P P S N H S N G H G H G H G H S N G R G H G H G H G H G H L S V P M M S M P Y P P P L M S M P
gm032903_Glyma1    S T A V - P Q S L H D S A P P S A H S N - - - - - - - - - - - - - - - - - - G H G H L P V P M M S M P Y P P P M M S M P
 
AT5G59570.1     - P V P S M V P I P G Y G N Q M G M - - - - - - - Q G Y Y Q Q Y S N H G N E S N Q Y M M Q Q N K F G T M V T Y P S V G G
gm030851_Glyma1    Y P P P M M S G M P - - H G H M G I P M P N S S A T S A Y H P Y N - - - - - - - - - M L H Q R D - - - - - - W P H L A P
gm032903_Glyma1    Y P P P M M S G M P H A H G H M G I P M P N S S A T S A Y H P Y N - - - - - - - - - M L H Q R D - - - - - - W P H L A P
 
AT5G59570.1     G D V N D K
gm030851_Glyma1    - - - N D K
gm032903_Glyma1    - - - N D K
 
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