fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022384 not found in 243aa AT3G46130.1 1st_not 0.525333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     MGFCSESFRFEG-----------------GGRNIRI-----GLNRTGKSCRLRWVNYLHP
pt022384_POPTR_ MKMMQDETR-KGPWTEQEDILLINFVNLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHP
                * : .:. * :*                 *.*.  :     *******************

AT5G59780.2     GLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPM
pt022384_POPTR_ GLKRGKMTPQEERLVLELHARWGNRWSRIARKLPGRTDNEIKNYWRTHTRKKAQERKSVV
                ********************:******:******************** ******:*  :

AT5G59780.2     SPTSSSSNCCSSSMTTTTSQ------------DTG--------GSNGKMNQECEDGYYSM
pt022384_POPTR_ SPSLSSSNCSSSSNITTVNSSSPPGTGEASFYDTGGLEQVASAGKNGEAVQGGEKG-YSM
                **: *****.***  **...            ***        *.**:  *  *.* ***

AT5G59780.2     DDIWREIDQSGANVIKPVKDNYYSEQSCYLNFPPLASPTWESSLESIWNMDADESKMSSF
pt022384_POPTR_ DDIWRDIE----NTIEPVCDG-FSEEGCNFSYPSLASPSWEYRPDILWSISGEESKMF--
                *****:*:    *.*:** *. :**:.* :.:*.****:**   : :*.:..:****   

AT5G59780.2     AIDQFPLSFEHGSGRL--
pt022384_POPTR_ ------LPYDDGTMLLTG
                      *.::.*:  *
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     M G F C S E S F R F E G - - - - - - - - - - - - - - - - - G G R N I R I - - - - - G L N R T G K S C R L R W V N Y L H P
pt022384_POPTR_    M K M M Q D E T R - K G P W T E Q E D I L L I N F V N L F G D R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P
 
AT5G59780.2     G L K R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M
pt022384_POPTR_    G L K R G K M T P Q E E R L V L E L H A R W G N R W S R I A R K L P G R T D N E I K N Y W R T H T R K K A Q E R K S V V
 
AT5G59780.2     S P T S S S S N C C S S S M T T T T S Q - - - - - - - - - - - - D T G - - - - - - - - G S N G K M N Q E C E D G Y Y S M
pt022384_POPTR_    S P S L S S S N C S S S S N I T T V N S S S P P G T G E A S F Y D T G G L E Q V A S A G K N G E A V Q G G E K G - Y S M
 
AT5G59780.2     D D I W R E I D Q S G A N V I K P V K D N Y Y S E Q S C Y L N F P P L A S P T W E S S L E S I W N M D A D E S K M S S F
pt022384_POPTR_    D D I W R D I E - - - - N T I E P V C D G - F S E E G C N F S Y P S L A S P S W E Y R P D I L W S I S G E E S K M F - -
 
AT5G59780.2     A I D Q F P L S F E H G S G R L - -
pt022384_POPTR_    - - - - - - L P Y D D G T M L L T G
 
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