fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032631 not found in 241aa AT3G46130.1 not_not 0.509333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     -------MGFCSE-------SFRFEGGGRN----IRI-GLNRTGKSCRLRWVNYLHPGLK
pt032631_POPTR_ MMQDEIRKGPWTEKEDILLINFVHLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPGLK
                        *  :*       .* .  *.*.     :: **********************

AT5G59780.2     RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPT
pt032631_POPTR_ RGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQERKGAMSPS
                ************************:***************************:* .***:

AT5G59780.2     SSSSNCCSSSMTTTTSQ------------DTG--------GSNGKMNQECEDGYYSMDDI
pt032631_POPTR_ LSSSNCSSSSNTTTVNSSPLPRTGETSFYDTGGLEQVALAGKNSEAVQGGEKG-YSMDDI
                 *****.*** ***...            ***        *.*.:  *  *.* ******

AT5G59780.2     WREIDQSGANVIKPVKDNYYSEQSCYLNFPPLASPTWESSLESIWNMDADESKMSSFAID
pt032631_POPTR_ WKDIE----NTIEPVCDG-FSEKGCNFSCPSLASPSWDYFPDTLWGFGEEEGKIF-----
                *::*:    *.*:** *. :**:.* :. *.****:*:   :::*.:. :*.*:      

AT5G59780.2     QFPLSFEHGSGRL--
pt032631_POPTR_ ---LPYDDGTTILTG
                   *.::.*:  *
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - M G F C S E - - - - - - - S F R F E G G G R N - - - - I R I - G L N R T G K S C R L R W V N Y L H P G L K
pt032631_POPTR_    M M Q D E I R K G P W T E K E D I L L I N F V H L F G D R R W D S I A K V S G L N R T G K S C R L R W V N Y L H P G L K
 
AT5G59780.2     R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M S P T
pt032631_POPTR_    R G K M T P Q E E R L V L E L H A K W G N R W S R I A R K L P G R T D N E I K N Y W R T H M R K K A Q E R K G A M S P S
 
AT5G59780.2     S S S S N C C S S S M T T T T S Q - - - - - - - - - - - - D T G - - - - - - - - G S N G K M N Q E C E D G Y Y S M D D I
pt032631_POPTR_    L S S S N C S S S S N T T T V N S S P L P R T G E T S F Y D T G G L E Q V A L A G K N S E A V Q G G E K G - Y S M D D I
 
AT5G59780.2     W R E I D Q S G A N V I K P V K D N Y Y S E Q S C Y L N F P P L A S P T W E S S L E S I W N M D A D E S K M S S F A I D
pt032631_POPTR_    W K D I E - - - - N T I E P V C D G - F S E K G C N F S C P S L A S P S W D Y F P D T L W G F G E E E G K I F - - - - -
 
AT5G59780.2     Q F P L S F E H G S G R L - -
pt032631_POPTR_    - - - L P Y D D G T T I L T G
 
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