fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022384 not found in 243aa AT3G46130.1 1st_not 0.525333333 II
Pt032631 not found in 241aa AT3G46130.1 not_not 0.509333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59780.2     MGFCSESFR-----------------FEGGGRNIRI----GLNRTGKSCRLRWVNYLHPG
pt022384_POPTR_ MKMMQDETRKGPWTEQEDILLINFVNLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPG
pt032631_POPTR_ --MMQDEIRKGPWTEKEDILLINFVHLFGDRRWDSIAKVSGLNRTGKSCRLRWVNYLHPG
                  : .:. *                 : *. *   *    ********************

AT5G59780.2     LKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMS
pt022384_POPTR_ LKRGKMTPQEERLVLELHARWGNRWSRIARKLPGRTDNEIKNYWRTHTRKKAQERKSVVS
pt032631_POPTR_ LKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQERKGAMS
                *******************:******:******************** ******:*  :*

AT5G59780.2     PTSSSSNCCSSSMTTTTSQ------------DTG--------GSNGKMNQECEDGYYSMD
pt022384_POPTR_ PSLSSSNCSSSSNITTVNSSSPPGTGEASFYDTGGLEQVASAGKNGEAVQGGEKG-YSMD
pt032631_POPTR_ PSLSSSNCSSSSNTTTVNSSPLPRTGETSFYDTGGLEQVALAGKNSEAVQGGEKG-YSMD
                *: *****.***  **...            ***        *.*.:  *  *.* ****

AT5G59780.2     DIWREIDQSGANVIKPVKDNYYSEQSCYLNFPPLASPTWESSLESIWNMDADESKMSSFA
pt022384_POPTR_ DIWRDIE----NTIEPVCDG-FSEEGCNFSYPSLASPSWEYRPDILWSISGEESKMF---
pt032631_POPTR_ DIWKDIE----NTIEPVCDG-FSEKGCNFSCPSLASPSWDYFPDTLWGFGEEEGKIF---
                ***::*:    *.*:** *. :**:.* :. *.****:*:   : :*.:. :*.*:    

AT5G59780.2     IDQFPLSFEHGSGRL--
pt022384_POPTR_ -----LPYDDGTMLLTG
pt032631_POPTR_ -----LPYDDGTTILTG
                     *.::.*:  *
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     M G F C S E S F R - - - - - - - - - - - - - - - - - F E G G G R N I R I - - - - G L N R T G K S C R L R W V N Y L H P G
pt022384_POPTR_    M K M M Q D E T R K G P W T E Q E D I L L I N F V N L F G D R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P G
pt032631_POPTR_    - - M M Q D E I R K G P W T E K E D I L L I N F V H L F G D R R W D S I A K V S G L N R T G K S C R L R W V N Y L H P G
 
AT5G59780.2     L K R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M S
pt022384_POPTR_    L K R G K M T P Q E E R L V L E L H A R W G N R W S R I A R K L P G R T D N E I K N Y W R T H T R K K A Q E R K S V V S
pt032631_POPTR_    L K R G K M T P Q E E R L V L E L H A K W G N R W S R I A R K L P G R T D N E I K N Y W R T H M R K K A Q E R K G A M S
 
AT5G59780.2     P T S S S S N C C S S S M T T T T S Q - - - - - - - - - - - - D T G - - - - - - - - G S N G K M N Q E C E D G Y Y S M D
pt022384_POPTR_    P S L S S S N C S S S S N I T T V N S S S P P G T G E A S F Y D T G G L E Q V A S A G K N G E A V Q G G E K G - Y S M D
pt032631_POPTR_    P S L S S S N C S S S S N T T T V N S S P L P R T G E T S F Y D T G G L E Q V A L A G K N S E A V Q G G E K G - Y S M D
 
AT5G59780.2     D I W R E I D Q S G A N V I K P V K D N Y Y S E Q S C Y L N F P P L A S P T W E S S L E S I W N M D A D E S K M S S F A
pt022384_POPTR_    D I W R D I E - - - - N T I E P V C D G - F S E E G C N F S Y P S L A S P S W E Y R P D I L W S I S G E E S K M F - - -
pt032631_POPTR_    D I W K D I E - - - - N T I E P V C D G - F S E K G C N F S C P S L A S P S W D Y F P D T L W G F G E E E G K I F - - -
 
AT5G59780.2     I D Q F P L S F E H G S G R L - -
pt022384_POPTR_    - - - - - L P Y D D G T M L L T G
pt032631_POPTR_    - - - - - L P Y D D G T T I L T G
 
0