fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041543 not found in 242aa AT5G59780.3 not_not 0.405333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     ---------MGFCSE--------SFRFEGGGRNIRI----GLNRTGKSCRLRWVNYLHPG
Os041543_Os12t0 MVTVREEIRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPG
                          *  :*        :.*: *  *   *    ********************

AT5G59780.2     LKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMS
Os041543_Os12t0 LKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMS
                ****:*:*:****:*****:******:***:***********************:*  **

AT5G59780.2     PTSSSS-----NC---------------------CSSSMTTTTSQDTGGSNGKMNQECED
Os041543_Os12t0 PSSSSSSLTYQSCHPETPSMIIGIEEQELHGGSGCITSIMKSTPVDMDG-----------
                *:****     .*                     * :*: .:*. * .*           

AT5G59780.2     GYYSMDDIWREIDQSGANVIK-PVKDNYYSEQSCYLNFPPLASPTWESSL-ESIWNMDAD
Os041543_Os12t0 --YPMDQIWMEIE--APNVLPGPCFDEAKDSASNSLSGPLLPYPMWDYYCPETCLRMD-D
                  *.**:** **:  ..**:  *  *:  .. *  *. * *. * *:    *:  .** *

AT5G59780.2     ESKMSSFAIDQFPLSFEHGSGRL---
Os041543_Os12t0 EIKVAP--------QFGYGKGVGPCY
                * *::.        .* :*.*
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - - - M G F C S E - - - - - - - - S F R F E G G G R N I R I - - - - G L N R T G K S C R L R W V N Y L H P G
Os041543_Os12t0    M V T V R E E I R K G P W T E Q E D L Q L V C T V R L F G E R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P G
 
AT5G59780.2     L K R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M S
Os041543_Os12t0    L K R G R M S P H E E R L I L E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R K K A Q E R K S N M S
 
AT5G59780.2     P T S S S S - - - - - N C - - - - - - - - - - - - - - - - - - - - - C S S S M T T T T S Q D T G G S N G K M N Q E C E D
Os041543_Os12t0    P S S S S S S L T Y Q S C H P E T P S M I I G I E E Q E L H G G S G C I T S I M K S T P V D M D G - - - - - - - - - - -
 
AT5G59780.2     G Y Y S M D D I W R E I D Q S G A N V I K - P V K D N Y Y S E Q S C Y L N F P P L A S P T W E S S L - E S I W N M D A D
Os041543_Os12t0    - - Y P M D Q I W M E I E - - A P N V L P G P C F D E A K D S A S N S L S G P L L P Y P M W D Y Y C P E T C L R M D - D
 
AT5G59780.2     E S K M S S F A I D Q F P L S F E H G S G R L - - -
Os041543_Os12t0    E I K V A P - - - - - - - - Q F G Y G K G V G P C Y
 
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