fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os039621 not found in 237aa AT5G59780.3 1st_not 0.410666666 II
Os041543 not found in 242aa AT5G59780.3 not_not 0.405333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59780.2     MGFCSESFRFEG-----------------GGRNIRI-----GLNRTGKSCRLRWVNYLHP
Os041543_Os12t0 MVTVREEIR-KGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHP
Os039621_Os11t0 MVTVREEMR-KGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHP
                *    *.:* :*                 * *.  :     *******************

AT5G59780.2     GLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPM
Os041543_Os12t0 GLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNM
Os039621_Os11t0 GLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERRGDM
                ***:*:*:*:**:*::****:******:***:***********************::  *

AT5G59780.2     SPTSSSSNCCSSSMTTTT---------SQDTGGSNG------KMNQECEDGYYSMDDIWR
Os041543_Os12t0 SPSSSSSSLTYQSCHPET-PSMIIGIEEQELHGGSGCITSIMKSTPVDMDG-YPMDQIWM
Os039621_Os11t0 SPSSSSSSLVYQSCLLDTVP--IISMDGGDIHDDRSCMARVLKSTQSVMDG-YTMDQIWK
                **:****.   .*    *           :  .. .      * .    ** *.**:** 

AT5G59780.2     EIDQSGA---NVIKPVKDNYYSEQSCYLNFPPLASPTWESSL-ESIWNMDADESKMSSFA
Os041543_Os12t0 EIEAPNVLPGPCFDEAKDSASNSLSG----PLLPYPMWDYYCPETCLRMDDEIK------
Os039621_Os11t0 EIEAPGAPSLLGIDEGKDKACSNLPC----PLLTSTMSDYSCPEVFWKIDNEETRM----
                **: ...     :.  **.  .. .     * *. .  :    *   .:* : .      

AT5G59780.2     IDQFPLSFEHGSGRL-----
Os041543_Os12t0 -----VAPQFGYGKGVGPCY
Os039621_Os11t0 -----LATQSGYGK------
                     :: : * *:
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     M G F C S E S F R F E G - - - - - - - - - - - - - - - - - G G R N I R I - - - - - G L N R T G K S C R L R W V N Y L H P
Os041543_Os12t0    M V T V R E E I R - K G P W T E Q E D L Q L V C T V R L F G E R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P
Os039621_Os11t0    M V T V R E E M R - K G P W T E Q E D L Q L V C T V R L F G D R R W D F V A K V S G L N R T G K S C R L R W V N Y L H P
 
AT5G59780.2     G L K R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M
Os041543_Os12t0    G L K R G R M S P H E E R L I L E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R K K A Q E R K S N M
Os039621_Os11t0    G L K H G R M S P K E E H L I I E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R K K A Q E R R G D M
 
AT5G59780.2     S P T S S S S N C C S S S M T T T T - - - - - - - - - S Q D T G G S N G - - - - - - K M N Q E C E D G Y Y S M D D I W R
Os041543_Os12t0    S P S S S S S S L T Y Q S C H P E T - P S M I I G I E E Q E L H G G S G C I T S I M K S T P V D M D G - Y P M D Q I W M
Os039621_Os11t0    S P S S S S S S L V Y Q S C L L D T V P - - I I S M D G G D I H D D R S C M A R V L K S T Q S V M D G - Y T M D Q I W K
 
AT5G59780.2     E I D Q S G A - - - N V I K P V K D N Y Y S E Q S C Y L N F P P L A S P T W E S S L - E S I W N M D A D E S K M S S F A
Os041543_Os12t0    E I E A P N V L P G P C F D E A K D S A S N S L S G - - - - P L L P Y P M W D Y Y C P E T C L R M D D E I K - - - - - -
Os039621_Os11t0    E I E A P G A P S L L G I D E G K D K A C S N L P C - - - - P L L T S T M S D Y S C P E V F W K I D N E E T R M - - - -
 
AT5G59780.2     I D Q F P L S F E H G S G R L - - - - -
Os041543_Os12t0    - - - - - V A P Q F G Y G K G V G P C Y
Os039621_Os11t0    - - - - - L A T Q S G Y G K - - - - - -
 
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