fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031768 not found in 1610aa AT5G59780.3 1st_not 0.432 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     ------------------------------MGFC-----SESFRFEGGGRNIRIGLNRTG
Sb031768_Sorbi1 AARSVGKQDSTEQARAAGFAGSTTFTLASSVGACLPMKSASSLSCTLGGET---GLNRTG
                                              :* *     :.*:    **..   ******

AT5G59780.2     KSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRT
Sb031768_Sorbi1 KSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRT
                ******************:*:*:****:*****:******:***:***************

AT5G59780.2     HMRKKAQEKKRPMSPTSSSSNCCSSSMTTTTS-QDTGGSNGKMNQECEDGY---------
Sb031768_Sorbi1 HMRKKAQERKRNMSPSSS-----SSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKG
                ********:** ***:**     ***:*  :.  ** .: *  .** ..*          

AT5G59780.2     -------YSMDDIWREIDQS---------GANVIKPVKDNYYSEQSCYLNFPPLASPT-W
Sb031768_Sorbi1 TPPDMDGYPMDQIWMEIEAPEVPSEVGFVGGN-----------ENVCSSLATPLPPPTVW
                       *.**:** **: .         *.*           *: *    .**..** *

AT5G59780.2     ESSLESIWNMDADESKMSSFAIDQFPLSFEHGSGRL-
Sb031768_Sorbi1 EYYPEACWKID-DEIKMAP----QF--SYSEGAGPCF
                *   *: *::* ** **:.    **  *:..*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G F C - - - - - S E S F R F E G G G R N I R I G L N R T G
Sb031768_Sorbi1    A A R S V G K Q D S T E Q A R A A G F A G S T T F T L A S S V G A C L P M K S A S S L S C T L G G E T - - - G L N R T G
 
AT5G59780.2     K S C R L R W V N Y L H P G L K R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T
Sb031768_Sorbi1    K S C R L R W V N Y L H P G L K R G R M S P H E E R L I L E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T
 
AT5G59780.2     H M R K K A Q E K K R P M S P T S S S S N C C S S S M T T T T S - Q D T G G S N G K M N Q E C E D G Y - - - - - - - - -
Sb031768_Sorbi1    H M R K K A Q E R K R N M S P S S S - - - - - S S S L T Y Q S G Y P D T P S T I G V E G Q E L H G G S G C I T S I L K G
 
AT5G59780.2     - - - - - - - Y S M D D I W R E I D Q S - - - - - - - - - G A N V I K P V K D N Y Y S E Q S C Y L N F P P L A S P T - W
Sb031768_Sorbi1    T P P D M D G Y P M D Q I W M E I E A P E V P S E V G F V G G N - - - - - - - - - - - E N V C S S L A T P L P P P T V W
 
AT5G59780.2     E S S L E S I W N M D A D E S K M S S F A I D Q F P L S F E H G S G R L -
Sb031768_Sorbi1    E Y Y P E A C W K I D - D E I K M A P - - - - Q F - - S Y S E G A G P C F
 
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