fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028959 QVGVGKLQLRLFCYSR in 101/407 AT5G59780.3 not_not 0.405333333 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     -------MGFCSESFRFEGGGRNIRIGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLV
Sb028959_Sorbi1 PALFILYVLY-------------VHAGLNRTGKSCRLRWVNYLHPGLKHGRMSPQEERLI
                       : :             :: **********************:*:*:******:

AT5G59780.2     LELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPTSSSSNCCSSSMT
Sb028959_Sorbi1 IELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKMSMSSPSSS---CSSLTY
                :****:******:***:***********************:* .**..***   ***   

AT5G59780.2     TTTSQDT----GGSNGKMN------------QECEDGYYSMDDIWREIDQSGANVIKPV-
Sb028959_Sorbi1 QACHLDTVPVIGMSSGDTHNGGCVTSALENTQSVMDG-YPMDQIWKEIEAPQAPALLGIA
                 :   **    * *.*. :            *.  ** *.**:**:**: . * .:  : 

AT5G59780.2     --KDNYYSEQSCYLNFPPLASPTWESSL-ESIWNMDADESKMSSFAIDQFPLSFEHGSGR
Sb028959_Sorbi1 EGKEKTCSSIPCHL---P-SSAMWDYKYPEVFWKMEDQEIMM------------------
                  *::  *. .*:*   * :*. *: .  * :*:*: :*  *                  

AT5G59780.2     L
Sb028959_Sorbi1 -
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - M G F C S E S F R F E G G G R N I R I G L N R T G K S C R L R W V N Y L H P G L K R G K M T P Q E E R L V
Sb028959_Sorbi1    P A L F I L Y V L Y - - - - - - - - - - - - - V H A G L N R T G K S C R L R W V N Y L H P G L K H G R M S P Q E E R L I
 
AT5G59780.2     L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M S P T S S S S N C C S S S M T
Sb028959_Sorbi1    I E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R K K A Q E R K M S M S S P S S S - - - C S S L T Y
 
AT5G59780.2     T T T S Q D T - - - - G G S N G K M N - - - - - - - - - - - - Q E C E D G Y Y S M D D I W R E I D Q S G A N V I K P V -
Sb028959_Sorbi1    Q A C H L D T V P V I G M S S G D T H N G G C V T S A L E N T Q S V M D G - Y P M D Q I W K E I E A P Q A P A L L G I A
 
AT5G59780.2     - - K D N Y Y S E Q S C Y L N F P P L A S P T W E S S L - E S I W N M D A D E S K M S S F A I D Q F P L S F E H G S G R
Sb028959_Sorbi1    E G K E K T C S S I P C H L - - - P - S S A M W D Y K Y P E V F W K M E D Q E I M M - - - - - - - - - - - - - - - - - -
 
AT5G59780.2     L
Sb028959_Sorbi1    -
 
0