fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031768 not found in 1610aa AT5G59780.3 1st_not 0.432 II
Sb028959 QVGVGKLQLRLFCYSR in 101/407 AT5G59780.3 not_not 0.405333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59780.2     ----------------MGFC-SESFRFEGG---------------GRNIRIGLNRTGKSC
Sb028959_Sorbi1 ---------------------PALFILY-----------------VLYVHAGLNRTGKSC
Sb031768_Sorbi1 AARSVGKQDSTEQARAAGFAGSTTFTLASSVGACLPMKSASSLSCTLGGETGLNRTGKSC
                                     .  * :                      . *********

AT5G59780.2     RLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMR
Sb028959_Sorbi1 RLRWVNYLHPGLKHGRMSPQEERLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMR
Sb031768_Sorbi1 RLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMR
                *************:*:*:*:****::****:******:***:******************

AT5G59780.2     KKAQEKKRPM-SPTSSSSNCCSSSMTTTT-------SQDTGGSNG------KMNQECEDG
Sb028959_Sorbi1 KKAQERKMSMSSPSSSCSSLTYQACHLDTVPVIGMSSGDTHNG-GCVTSALENTQSVMDG
Sb031768_Sorbi1 KKAQERKRNM-SPSSSSSSLTYQSGYPDTPSTIGVEGQELHGGSGCITSILKGTPPDMDG
                *****:*  * **:**.*.   .:    *       . :  .. *      : .    **

AT5G59780.2     YYSMDDIWREIDQSGANVIKPVKDNYYSEQSCYLNFPPLASPT-WES-SLESIWNMDADE
Sb028959_Sorbi1 -YPMDQIWKEIEAPQAPALLGIAEG--KEKTCSSIPCHLPSSAMWDYKYPEVFWKMEDQE
Sb031768_Sorbi1 -YPMDQIWMEIEAPEVPSEVGFVGG--NENVCSSLATPLPPPTVWEY-YPEACWKIDD-E
                 *.**:** **: . .     .  .  .*: *      *...: *:    *  *:::  *

AT5G59780.2     SKMSSFAIDQFPLSFEHGSGRL-
Sb028959_Sorbi1 IMM--------------------
Sb031768_Sorbi1 IKMAP----QF--SYSEGAGPCF
                  *
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - - - - - - - - - - M G F C - S E S F R F E G G - - - - - - - - - - - - - - - G R N I R I G L N R T G K S C
Sb028959_Sorbi1    - - - - - - - - - - - - - - - - - - - - - P A L F I L Y - - - - - - - - - - - - - - - - - V L Y V H A G L N R T G K S C
Sb031768_Sorbi1    A A R S V G K Q D S T E Q A R A A G F A G S T T F T L A S S V G A C L P M K S A S S L S C T L G G E T G L N R T G K S C
 
AT5G59780.2     R L R W V N Y L H P G L K R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R
Sb028959_Sorbi1    R L R W V N Y L H P G L K H G R M S P Q E E R L I I E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R
Sb031768_Sorbi1    R L R W V N Y L H P G L K R G R M S P H E E R L I L E L H A R W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R
 
AT5G59780.2     K K A Q E K K R P M - S P T S S S S N C C S S S M T T T T - - - - - - - S Q D T G G S N G - - - - - - K M N Q E C E D G
Sb028959_Sorbi1    K K A Q E R K M S M S S P S S S C S S L T Y Q A C H L D T V P V I G M S S G D T H N G - G C V T S A L E N T Q S V M D G
Sb031768_Sorbi1    K K A Q E R K R N M - S P S S S S S S L T Y Q S G Y P D T P S T I G V E G Q E L H G G S G C I T S I L K G T P P D M D G
 
AT5G59780.2     Y Y S M D D I W R E I D Q S G A N V I K P V K D N Y Y S E Q S C Y L N F P P L A S P T - W E S - S L E S I W N M D A D E
Sb028959_Sorbi1    - Y P M D Q I W K E I E A P Q A P A L L G I A E G - - K E K T C S S I P C H L P S S A M W D Y K Y P E V F W K M E D Q E
Sb031768_Sorbi1    - Y P M D Q I W M E I E A P E V P S E V G F V G G - - N E N V C S S L A T P L P P P T V W E Y - Y P E A C W K I D D - E
 
AT5G59780.2     S K M S S F A I D Q F P L S F E H G S G R L -
Sb028959_Sorbi1    I M M - - - - - - - - - - - - - - - - - - - -
Sb031768_Sorbi1    I K M A P - - - - Q F - - S Y S E G A G P C F
 
1