fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041124 not found in 255aa AT3G46130.1 1st_not 0.488 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     -------MGFCSESFRFE-------GGGRNIRI-----GLNRTGKSCRLRWVNYLHPGLK
gm041124_Glyma1 MVQQEVRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK
                        *  :*.  *:        *.*.  :     **********************

AT5G59780.2     RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPMSPT
gm041124_Glyma1 RGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQDKKRGEAAS
                ****************:*******:******************* ******:***  :.:

AT5G59780.2     SSSSNCCSSSMTTTTS--------------QDTGG-----SNGKMNQECEDGYYSMDDIW
gm041124_Glyma1 SSSSSVDSSISSNNHAVDPHASKKAGEESFYDTGGHGVTASTQDQGQKGEQGLFSMDDIW
                ****.  **  :.. :               ****     *. . .*: *:* :******

AT5G59780.2     REIDQSGA--NVIKPVKDNYYSEQSCYLNFPP-LASP-TWESSLESIWNMDADESKMSSF
gm041124_Glyma1 KDIDNMSEENNTLQPVYEG-NSEEGCNFSCPPQVPSPSSWEYSSDPLWVMDEE----SLF
                ::**: .   *.::** :.  **:.* :. ** :.** :** * :.:* ** :    * *

AT5G59780.2     AIDQFPLS------FEHGSGRL--
gm041124_Glyma1 C----PLSEPYFSCYAQGSVFLTG
                .    ***      : :**  *
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - M G F C S E S F R F E - - - - - - - G G G R N I R I - - - - - G L N R T G K S C R L R W V N Y L H P G L K
gm041124_Glyma1    M V Q Q E V R K G P W T E Q E D F K L V S F V G L F G D R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P G L K
 
AT5G59780.2     R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R K K A Q E K K R P M S P T
gm041124_Glyma1    R G K M T P Q E E R L V L E L H S K W G N R W S R I A R K L P G R T D N E I K N Y W R T L M R K K A Q D K K R G E A A S
 
AT5G59780.2     S S S S N C C S S S M T T T T S - - - - - - - - - - - - - - Q D T G G - - - - - S N G K M N Q E C E D G Y Y S M D D I W
gm041124_Glyma1    S S S S S V D S S I S S N N H A V D P H A S K K A G E E S F Y D T G G H G V T A S T Q D Q G Q K G E Q G L F S M D D I W
 
AT5G59780.2     R E I D Q S G A - - N V I K P V K D N Y Y S E Q S C Y L N F P P - L A S P - T W E S S L E S I W N M D A D E S K M S S F
gm041124_Glyma1    K D I D N M S E E N N T L Q P V Y E G - N S E E G C N F S C P P Q V P S P S S W E Y S S D P L W V M D E E - - - - S L F
 
AT5G59780.2     A I D Q F P L S - - - - - - F E H G S G R L - -
gm041124_Glyma1    C - - - - P L S E P Y F S C Y A Q G S V F L T G
 
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