fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030927 not found in 249aa AT5G59780.3 not_not 0.442666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G59780.2     -------MGFCSESFRFE-------GGGRNIRI-----GLNRTGKSCRLRWVNYLHPGLK
gm030927_Glyma1 MVQQEIRRGPWTEQEDYKLVYFVNMFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPDLK
                        *  :*.  ::        *.*.  :     *******************.**

AT5G59780.2     RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMR-KKAQEKKRPMSP
gm030927_Glyma1 RGKLTPQEEHLVMDLHSKWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKKAQEKKHASAA
                ***:*****:**::**:*******:***:****************** *******:. :.

AT5G59780.2     TSSSSNCCSSSMTTTTSQDTGGSNGKMNQECED--GY--------------YSMDDIWRE
gm030927_Glyma1 SPVSSSCQSSLSSNNHVVDSHASKEVGEESCYDTGGYDDGMMMGLIGGEKGYSMDDIWKD
                :. **.* **  :..   *: .*:   ::.* *  **              *******::

AT5G59780.2     IDQSGANVI-----KPVKDNYYSEQSCYLNFPP-----LASPTWES---SLESIWNMDAD
gm030927_Glyma1 IMSEEENNIYNNNLQPVYEG-HSEEGCNFSCPPPPMIMPSPPSWDQYNISSQPLWVMDEE
                * ..  * *     :** :. :**:.* :. **      :.*:*:.   * :.:* ** :

AT5G59780.2     ESKMSSFAIDQFPLSFEHGSGRL
gm030927_Glyma1 ETLM------QIQVLI-------
                *: *      *: : :
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - M G F C S E S F R F E - - - - - - - G G G R N I R I - - - - - G L N R T G K S C R L R W V N Y L H P G L K
gm030927_Glyma1    M V Q Q E I R R G P W T E Q E D Y K L V Y F V N M F G D R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P D L K
 
AT5G59780.2     R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R - K K A Q E K K R P M S P
gm030927_Glyma1    R G K L T P Q E E H L V M D L H S K W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R K K K A Q E K K H A S A A
 
AT5G59780.2     T S S S S N C C S S S M T T T T S Q D T G G S N G K M N Q E C E D - - G Y - - - - - - - - - - - - - - Y S M D D I W R E
gm030927_Glyma1    S P V S S S C Q S S L S S N N H V V D S H A S K E V G E E S C Y D T G G Y D D G M M M G L I G G E K G Y S M D D I W K D
 
AT5G59780.2     I D Q S G A N V I - - - - - K P V K D N Y Y S E Q S C Y L N F P P - - - - - L A S P T W E S - - - S L E S I W N M D A D
gm030927_Glyma1    I M S E E E N N I Y N N N L Q P V Y E G - H S E E G C N F S C P P P P M I M P S P P S W D Q Y N I S S Q P L W V M D E E
 
AT5G59780.2     E S K M S S F A I D Q F P L S F E H G S G R L
gm030927_Glyma1    E T L M - - - - - - Q I Q V L I - - - - - - -
 
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