fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G59780.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041124 not found in 255aa AT3G46130.1 1st_not 0.488 II
Gm030927 not found in 249aa AT5G59780.3 not_not 0.442666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G59780.2     -------MGFCSESFRFE-------GGGRNIRI-----GLNRTGKSCRLRWVNYLHPGLK
gm030927_Glyma1 MVQQEIRRGPWTEQEDYKLVYFVNMFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPDLK
gm041124_Glyma1 MVQQEVRKGPWTEQEDFKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK
                        *  :*.  ::        *.*.  :     *******************.**

AT5G59780.2     RGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMR-KKAQEKKRPMSP
gm030927_Glyma1 RGKLTPQEEHLVMDLHSKWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKKAQEKKHASAA
gm041124_Glyma1 RGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMR-KKAQDKKRGEAA
                ***:*****:**::**:*******:***:*************** ** ****:**:  :.

AT5G59780.2     TSSSSNCCSSSMTTT--------------TSQDTGG--------SNGKMNQE--CEDGYY
gm030927_Glyma1 SPVSSSCQSSLSSNNHVVDSHASKEVGEESCYDTGGY-------DDGMMMGLIGGEKG-Y
gm041124_Glyma1 SSSSSSVDSSISSNNHAVDPHASKKAGEESFYDTGGHGVTASTQDQGQK-----GEQGLF
                :. **.  **  :..              :  ****        .:*        *.* :

AT5G59780.2     SMDDIWREID-QSGA------NVIKPVKDNYYSEQSCYLNFPP----LASP-TWE---SS
gm030927_Glyma1 SMDDIWKDI--MSEEENNIYNNNLQPVYEG-HSEEGCNFSCPPPPMIMPSPPSWDQYNIS
gm041124_Glyma1 SMDDIWKDIDNMSEE-----NNTLQPVYEG-NSEEGCNFSCPPQ---VPSPSSWE---YS
                ******::*   *        * ::** :.  **:.* :. **    :.** :*:    *

AT5G59780.2     LESIWNMDADESKMSSFAIDQFPLS------FEHGSGRL--
gm030927_Glyma1 SQPLWVMDEEETL-------------------MQIQVLI--
gm041124_Glyma1 SDPLWVMDEESLFC--------PLSEPYFSCYAQGSVFLTG
                 :.:* ** :.                      : .  :
BoxShade v3.31 C (beta, 970507) Output
AT5G59780.2     - - - - - - - M G F C S E S F R F E - - - - - - - G G G R N I R I - - - - - G L N R T G K S C R L R W V N Y L H P G L K
gm030927_Glyma1    M V Q Q E I R R G P W T E Q E D Y K L V Y F V N M F G D R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P D L K
gm041124_Glyma1    M V Q Q E V R K G P W T E Q E D F K L V S F V G L F G D R R W D F I A K V S G L N R T G K S C R L R W V N Y L H P G L K
 
AT5G59780.2     R G K M T P Q E E R L V L E L H A K W G N R W S K I A R K L P G R T D N E I K N Y W R T H M R - K K A Q E K K R P M S P
gm030927_Glyma1    R G K L T P Q E E H L V M D L H S K W G N R W S R I A R R L P G R T D N E I K N Y W R T H M R K K K A Q E K K H A S A A
gm041124_Glyma1    R G K M T P Q E E R L V L E L H S K W G N R W S R I A R K L P G R T D N E I K N Y W R T L M R - K K A Q D K K R G E A A
 
AT5G59780.2     T S S S S N C C S S S M T T T - - - - - - - - - - - - - - T S Q D T G G - - - - - - - - S N G K M N Q E - - C E D G Y Y
gm030927_Glyma1    S P V S S S C Q S S L S S N N H V V D S H A S K E V G E E S C Y D T G G Y - - - - - - - D D G M M M G L I G G E K G - Y
gm041124_Glyma1    S S S S S S V D S S I S S N N H A V D P H A S K K A G E E S F Y D T G G H G V T A S T Q D Q G Q K - - - - - G E Q G L F
 
AT5G59780.2     S M D D I W R E I D - Q S G A - - - - - - N V I K P V K D N Y Y S E Q S C Y L N F P P - - - - L A S P - T W E - - - S S
gm030927_Glyma1    S M D D I W K D I - - M S E E E N N I Y N N N L Q P V Y E G - H S E E G C N F S C P P P P M I M P S P P S W D Q Y N I S
gm041124_Glyma1    S M D D I W K D I D N M S E E - - - - - N N T L Q P V Y E G - N S E E G C N F S C P P Q - - - V P S P S S W E - - - Y S
 
AT5G59780.2     L E S I W N M D A D E S K M S S F A I D Q F P L S - - - - - - F E H G S G R L - -
gm030927_Glyma1    S Q P L W V M D E E E T L - - - - - - - - - - - - - - - - - - - M Q I Q V L I - -
gm041124_Glyma1    S D P L W V M D E E S L F C - - - - - - - - P L S E P Y F S C Y A Q G S V F L T G
 
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