fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G60440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004321 not found in 244aa AT5G60440.1 1st_1st 0.363636363 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G60440.1     MVKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVF
pt004321_POPTR_ MVRKSKGRQKLEMVKIPNESNLMVTFSKRRSGLFKKASELCTLCGAEVSIIVFSPGKKVF
                **:*******:****: ***** *************************:*:*****:***

AT5G60440.1     SFGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKY
pt004321_POPTR_ SFGHPSVEKVMERYLSGN--IPQTSGAFHLIEAHRNARVHELNMQLTQVANQLEVEKKRG
                *****.*:.*::*::..*   *:  . ::* *::**: *::** :**** .***.***: 

AT5G60440.1     DELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASR-FFQANVPNFY
pt004321_POPTR_ EELDRMRKASQSR-NWWEKPLQELDLAQLQQLRAALQDLKQDVTRHAKQILIQNSAPQPF
                :**.::*: :::  ****.*::** *:**: ::. *::**: ** .*.: ::* ..*: :

AT5G60440.1     VGSSSNNAAFGIDDGSHINPDMDLFSQRRMMDINAFNYNQNQIHPNHALPPFGNNAYGIN
pt004321_POPTR_ IAANPSTS------GNH------LFDTRNTGFIS-----------NMTVPPFNTNMSGT-
                :.:....:      *.*      **. *.   *.           * ::***..*  *  

AT5G60440.1     EGFVPEYNVNFRPEYNPNQNQIQNQNQVQIQIQNQSFKRENISEYEHHHGYPPQSRSDYY
pt004321_POPTR_ -----PFNTNM-----------------------------TASPFNASSAMPPFGYSLGY
                      :*.*:                             . * ::   . ** . *  *

AT5G60440.1     -----
pt004321_POPTR_ GTSFF
BoxShade v3.31 C (beta, 970507) Output
AT5G60440.1     M V K K S K G R Q K I E M V K M K N E S N L Q V T F S K R R S G L F K K A S E L C T L C G A E V A I V V F S P G R K V F
pt004321_POPTR_    M V R K S K G R Q K L E M V K I P N E S N L M V T F S K R R S G L F K K A S E L C T L C G A E V S I I V F S P G K K V F
 
AT5G60440.1     S F G H P N V D S V I D R F I N N N P L P P H Q H N N M Q L R E T R R N S I V Q D L N N H L T Q V L S Q L E T E K K K Y
pt004321_POPTR_    S F G H P S V E K V M E R Y L S G N - - I P Q T S G A F H L I E A H R N A R V H E L N M Q L T Q V A N Q L E V E K K R G
 
AT5G60440.1     D E L K K I R E K T K A L G N W W E D P V E E L A L S Q L E G F K G N L E N L K K V V T V E A S R - F F Q A N V P N F Y
pt004321_POPTR_    E E L D R M R K A S Q S R - N W W E K P L Q E L D L A Q L Q Q L R A A L Q D L K Q D V T R H A K Q I L I Q N S A P Q P F
 
AT5G60440.1     V G S S S N N A A F G I D D G S H I N P D M D L F S Q R R M M D I N A F N Y N Q N Q I H P N H A L P P F G N N A Y G I N
pt004321_POPTR_    I A A N P S T S - - - - - - G N H - - - - - - L F D T R N T G F I S - - - - - - - - - - - N M T V P P F N T N M S G T -
 
AT5G60440.1     E G F V P E Y N V N F R P E Y N P N Q N Q I Q N Q N Q V Q I Q I Q N Q S F K R E N I S E Y E H H H G Y P P Q S R S D Y Y
pt004321_POPTR_    - - - - - P F N T N M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T A S P F N A S S A M P P F G Y S L G Y
 
AT5G60440.1     - - - - -
pt004321_POPTR_    G T S F F
 
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