fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G60450.1 ACSGVMDLDRFPRVLQG at 517/788 in AT5G60450.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033911 not found in 792aa AT5G60450.1 1st_1st 0.562714187 Ia

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G60450.1     MEFDLNTEIAEVEEEENDDVGVGVGGGTRIDKGRLGISPSSSSSCSSGSSSSSSSTGSAS
gm033911_Glyma1 MEIDLNDAVTSEAEKSASCNG-------ECEKGAALSSPTCSSSGSSSTRVSSS------
                **:***  ::.  *:. .  *       . :**    **:.*** **.:  ***      

AT5G60450.1     SIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIVCRVV
gm033911_Glyma1 --YIELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFSPMEMPTYDLQPQIFCRVV
                  * ***********.****************** * .*  **:*:*.:**:***.****

AT5G60450.1     NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKT
gm033911_Glyma1 NIQLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKT
                *:******:.***********  *:: :  ****:::**.:** * ::..* ********

AT5G60450.1     LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH
gm033911_Glyma1 LTASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRH
                ***********************.*****:*******:**********************

AT5G60450.1     LLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNS-CSNIL
gm033911_Glyma1 LLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYYPNFL
                *************************.*.******************:**: .:*  .*:*

AT5G60450.1     SLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPERR
gm033911_Glyma1 SSVANAISAKSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKFEMDESPERR
                * ****:*:************:**:*.:**:***.**:.** *****:*:****:*****

AT5G60450.1     C-AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSS
gm033911_Glyma1 CTSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSS
                * :*:***:.*****:**:******:*****.:  :**:******:***.*** ******

AT5G60450.1     PRPKRPWAGLLDTTPPGNPITKRGGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRR
gm033911_Glyma1 RRLKKLRPGLL-AAAPNHLTTGSSGFMDSEESVRSSKVLQGQENTGFMSLYYGCDTVTKQ
                 * *:  .*** ::.*.:  *  .**:* *****.********* *  *   * *.:.::

AT5G60450.1     ILDFAMQSHANPVLVSSRVKD-RFGEFVDATGVNPAC-SGVMDLDRFPRVLQGQEICSLK
gm033911_Glyma1 P-EFEIRSPSHPNLASTGVRKIAAAEFMR---VHPSSYAGFTETNMFPRVLQGQEICPFR
                  :* ::* ::* *.*: *:.   .**:    *:*:. :*. : : ***********.::

AT5G60450.1     SFPQFAG-----FSPAAAPNPFAY------QANKSSYYPLALHGIRSTHVPYQNPYNAGN
gm033911_Glyma1 S---LAGKVDLNFGSWGKPN-VSYTNYNLHQATKPNFHSFGPEVVQTAYFPYGDIHKAGQ
                *   :**     *.. . ** .:*      **.*..::.:. . :::::.** : ::**:

AT5G60450.1     QSSGPPSRAINFGEETRKFDA---------QNEGGLPNNVTA--------DLPFKIDMMG
gm033911_Glyma1 GSSMLCSNPTNFQREDIPFNTPSIQSGITIPNEQKLQDNISGAASLGANMRIPNDDNFKG
                 **   *.. ** .*   *::          **  * :*::.         :* . :: *

AT5G60450.1     KQKGSELNMNASSGCKLFGFSLPVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNG
gm033911_Glyma1 K-------VNA---CKLFGFPLSRETTAQNLQNSSKRSCTKVHKQGSLVGRAIDLSRLSS
                *       :**   ******.*. **.*.: *.**** ********* **********..

AT5G60450.1     YDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKE
gm033911_Glyma1 YNDLLIELERLFSMEGLLIDPNKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIHTQE
                *:***:******.***** **:*************:*********:**:** ***::*:*

AT5G60450.1     EVENA------NDDNKSCLEQAALMMEASKSSSVSQPDSSPTITRV
gm033911_Glyma1 EVEKMTIGMMINDDSQSCLEQAPVMVEASKSSSVGQPDSSPTVVRM
                ***:       ***.:******.:*:********.*******:.*:


BoxShade v3.31 C (beta, 970507) Output
AT5G60450.1     M E F D L N T E I A E V E E E E N D D V G V G V G G G T R I D K G R L G I S P S S S S S C S S G S S S S S S S T G S A S
gm033911_Glyma1    M E I D L N D A V T S E A E K S A S C N G - - - - - - - E C E K G A A L S S P T C S S S G S S S T R V S S S - - - - - -
 
AT5G60450.1     S I Y S E L W H A C A G P L T C L P K K G N V V V Y F P Q G H L E Q D A M V S Y S S P L E I P K F D L N P Q I V C R V V
gm033911_Glyma1    - - Y I E L W H A C A G P L T S L P K K G N V V V Y F P Q G H L E Q A A S F S P F S P M E M P T Y D L Q P Q I F C R V V
 
AT5G60450.1     N V Q L L A N K D T D E V Y T Q V T L L P L Q E F S M L N G E G K E V K E L G G E E E R N G S S S V K R T P H M F C K T
gm033911_Glyma1    N I Q L L A N K E N D E V Y T Q V T L L P Q A E L A G M Y M E G K E L E K L G A D E E G N E T T P T K S T P H M F C K T
 
AT5G60450.1     L T A S D T S T H G G F S V P R R A A E D C F A P L D Y K Q Q R P S Q E L I A K D L H G V E W K F R H I Y R G Q P R R H
gm033911_Glyma1    L T A S D T S T H G G F S V P R R A A E D C F P P L D Y K K Q R P S Q E L V A K D L H G V E W K F R H I Y R G Q P R R H
 
AT5G60450.1     L L T T G W S I F V S Q K N L V S G D A V L F L R D E G G E L R L G I R R A A R P R N G L P D S I I E K N S - C S N I L
gm033911_Glyma1    L L T T G W S I F V S Q K N L V S G D A V L F L R G E N G E L R L G I R R A A R P R N G L P E S I V G S Q S Y Y P N F L
 
AT5G60450.1     S L V A N A V S T K S M F H V F Y S P R A T H A E F V I P Y E K Y I T S I R S P V C I G T R F R M R F E M D D S P E R R
gm033911_Glyma1    S S V A N A I S A K S M F H V F Y S P R A S H A D F A V P Y Q K Y I K S I K N P V T I G T R F K M K F E M D E S P E R R
 
AT5G60450.1     C - A G V V T G V C D L D P Y R W P N S K W R C L L V R W D E S F V S D H Q E R V S P W E I D P S V S L P H L S I Q S S
gm033911_Glyma1    C T S G I V T G M S D L D P Y K W P K S K W R C L M V R W D E D I E I N H Q D R V S P W E V D P S A S L P P L S I Q S S
 
AT5G60450.1     P R P K R P W A G L L D T T P P G N P I T K R G G F L D F E E S V R P S K V L Q G Q E N I G S A S P S Q G F D V M N R R
gm033911_Glyma1    R R L K K L R P G L L - A A A P N H L T T G S S G F M D S E E S V R S S K V L Q G Q E N T G F M S L Y Y G C D T V T K Q
 
AT5G60450.1     I L D F A M Q S H A N P V L V S S R V K D - R F G E F V D A T G V N P A C - S G V M D L D R F P R V L Q G Q E I C S L K
gm033911_Glyma1    P - E F E I R S P S H P N L A S T G V R K I A A A E F M R - - - V H P S S Y A G F T E T N M F P R V L Q G Q E I C P F R
 
AT5G60450.1     S F P Q F A G - - - - - F S P A A A P N P F A Y - - - - - - Q A N K S S Y Y P L A L H G I R S T H V P Y Q N P Y N A G N
gm033911_Glyma1    S - - - L A G K V D L N F G S W G K P N - V S Y T N Y N L H Q A T K P N F H S F G P E V V Q T A Y F P Y G D I H K A G Q
 
AT5G60450.1     Q S S G P P S R A I N F G E E T R K F D A - - - - - - - - - Q N E G G L P N N V T A - - - - - - - - D L P F K I D M M G
gm033911_Glyma1    G S S M L C S N P T N F Q R E D I P F N T P S I Q S G I T I P N E Q K L Q D N I S G A A S L G A N M R I P N D D N F K G
 
AT5G60450.1     K Q K G S E L N M N A S S G C K L F G F S L P V E T P A S K P Q S S S K R I C T K V H K Q G S Q V G R A I D L S R L N G
gm033911_Glyma1    K - - - - - - - V N A - - - C K L F G F P L S R E T T A Q N L Q N S S K R S C T K V H K Q G S L V G R A I D L S R L S S
 
AT5G60450.1     Y D D L L M E L E R L F N M E G L L R D P E K G W R I L Y T D S E N D M M V V G D D P W H D F C N V V W K I H L Y T K E
gm033911_Glyma1    Y N D L L I E L E R L F S M E G L L I D P N K G W R I L Y T D S E N D I M V V G D D P W H E F C D V V S K I H I H T Q E
 
AT5G60450.1     E V E N A - - - - - - N D D N K S C L E Q A A L M M E A S K S S S V S Q P D S S P T I T R V
gm033911_Glyma1    E V E K M T I G M M I N D D S Q S C L E Q A P V M V E A S K S S S V G Q P D S S P T V V R M
 
0