fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G60480.1 TTSSMSLNLKL at 185/191 in AT5G60480.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 1st_not 0.421203438 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G60480.1     ------------------------------------------------------------
gm050382_Glyma1 MDITPTTTIINTTTTPSAAKSPEHETETPTRITTPITPTTTKTLSFSNGVLKRHHHHHLH
                                                                            

AT5G60480.1     ----MVVLYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCHRNFHRRS
gm050382_Glyma1 HPMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHRNFHRRE
                     ** *:*******..*** ******** *..*:  :**.*::* ***********.

AT5G60480.1     PSDG------------FSQHR-SPPSPLQLQPLAPVPN-----------------LLLSL
gm050382_Glyma1 PEDPPITSNTTHVIEYQPHHRHHPPPPLHAAAAARSPNSASPPPISSSYYPSAPHMLLAL
                *.*              .:**  **.**:  . *  **                 :**:*

AT5G60480.1     SSGFFGPSDQEVKNKFTVERDVRKTAMIKKHKRTKFTAEQKVKMRGFAERAGWKINGWDE
gm050382_Glyma1 SAGLAAPPESTA---------APSAALSRKRFRTKFSQEQKEKMHKFAEKVGWKIQKRDE
                *:*: .*.:. .         . .:*: :*: ****: *** **: ***:.****:  **

AT5G60480.1     KWVREFCSEVGIERKVLKVWIHNNK----------YFNN---------------------
gm050382_Glyma1 DLIHEFCNEVGVDRSVLKVWMHNNKNTFAKKDNNIVFENPNNNHGSGSGGGEDPAEDPSR
                . ::***.***::*.*****:****           *:*                     

AT5G60480.1     --------GRSRDTTSSMSLNLKL
gm050382_Glyma1 NHYGGVNVGANGSSSSS-------
                        * . .::**
BoxShade v3.31 C (beta, 970507) Output
AT5G60480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm050382_Glyma1    M D I T P T T T I I N T T T T P S A A K S P E H E T E T P T R I T T P I T P T T T K T L S F S N G V L K R H H H H H L H
 
AT5G60480.1     - - - - M V V L Y N E C L K N H A V S L G G H A L D G C G E F T P K S T T I L T D P P S L R C D A C G C H R N F H R R S
gm050382_Glyma1    H P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R N F H R R E
 
AT5G60480.1     P S D G - - - - - - - - - - - - F S Q H R - S P P S P L Q L Q P L A P V P N - - - - - - - - - - - - - - - - - L L L S L
gm050382_Glyma1    P E D P P I T S N T T H V I E Y Q P H H R H H P P P P L H A A A A A R S P N S A S P P P I S S S Y Y P S A P H M L L A L
 
AT5G60480.1     S S G F F G P S D Q E V K N K F T V E R D V R K T A M I K K H K R T K F T A E Q K V K M R G F A E R A G W K I N G W D E
gm050382_Glyma1    S A G L A A P P E S T A - - - - - - - - - A P S A A L S R K R F R T K F S Q E Q K E K M H K F A E K V G W K I Q K R D E
 
AT5G60480.1     K W V R E F C S E V G I E R K V L K V W I H N N K - - - - - - - - - - Y F N N - - - - - - - - - - - - - - - - - - - - -
gm050382_Glyma1    D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K D N N I V F E N P N N N H G S G S G G G E D P A E D P S R
 
AT5G60480.1     - - - - - - - - G R S R D T T S S M S L N L K L
gm050382_Glyma1    N H Y G G V N V G A N G S S S S S - - - - - - -
 
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