Input
| Putative repression domain
|
|
AT5G60830.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt026549 |
not found in 164aa |
AT5G60830.1 |
1st_1st |
0.258666666 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G60830.1 ME---------------------SSSVHRSHCFDILDGVPLHDDHFNSAFLPNTDFNVHL
pt026549_POPTR_ MQPIVESTNHTPTQANISENPESSSSLFDKFLINSLIHVPLHIPS------PNT------
*: ***:. .. :: * **** ***
AT5G60830.1 QSNVSTRINNQSHLDPNAENIFHNEGLAPEERRARRMVSNRESARRSRMRKKKQIEELQQ
pt026549_POPTR_ -SSVST---DSTLAEPRDQQL----GIS-NEKKLRRMISNRESARRSRMRRKKQIEDLQY
*.*** :.: :*. ::: *:: :*:: ***:************:*****:**
AT5G60830.1 QVEQLMMLNHHLSEKVINLLESNHQILQENSQLKEKVSSFHLLMADVLLPMRNAESNIND
pt026549_POPTR_ RVNQLQNMNHQLSEKVIHLLESNHQTLQENSQLKEKVSSLQVVLSDLLTPLRNVDD--GD
:*:** :**:******:******* *************::::::*:* *:**.:. .*
AT5G60830.1 RNVNYLRGEPSNRPTNSPFASSTMIDAMYATSDYYSSNYLLAFVCRY
pt026549_POPTR_ CNSIHLK----------------------------------------
* :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G60830.1 |
M |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
S |
S |
V |
H |
R |
S |
H |
C |
F |
D |
I |
L |
D |
G |
V |
P |
L |
H |
D |
D |
H |
F |
N |
S |
A |
F |
L |
P |
N |
T |
D |
F |
N |
V |
H |
L |
pt026549_POPTR_ |
M |
Q |
P |
I |
V |
E |
S |
T |
N |
H |
T |
P |
T |
Q |
A |
N |
I |
S |
E |
N |
P |
E |
S |
S |
S |
S |
L |
F |
D |
K |
F |
L |
I |
N |
S |
L |
I |
H |
V |
P |
L |
H |
I |
P |
S |
- |
- |
- |
- |
- |
- |
P |
N |
T |
- |
- |
- |
- |
- |
- |
|
AT5G60830.1 |
Q |
S |
N |
V |
S |
T |
R |
I |
N |
N |
Q |
S |
H |
L |
D |
P |
N |
A |
E |
N |
I |
F |
H |
N |
E |
G |
L |
A |
P |
E |
E |
R |
R |
A |
R |
R |
M |
V |
S |
N |
R |
E |
S |
A |
R |
R |
S |
R |
M |
R |
K |
K |
K |
Q |
I |
E |
E |
L |
Q |
Q |
pt026549_POPTR_ |
- |
S |
S |
V |
S |
T |
- |
- |
- |
D |
S |
T |
L |
A |
E |
P |
R |
D |
Q |
Q |
L |
- |
- |
- |
- |
G |
I |
S |
- |
N |
E |
K |
K |
L |
R |
R |
M |
I |
S |
N |
R |
E |
S |
A |
R |
R |
S |
R |
M |
R |
R |
K |
K |
Q |
I |
E |
D |
L |
Q |
Y |
|
AT5G60830.1 |
Q |
V |
E |
Q |
L |
M |
M |
L |
N |
H |
H |
L |
S |
E |
K |
V |
I |
N |
L |
L |
E |
S |
N |
H |
Q |
I |
L |
Q |
E |
N |
S |
Q |
L |
K |
E |
K |
V |
S |
S |
F |
H |
L |
L |
M |
A |
D |
V |
L |
L |
P |
M |
R |
N |
A |
E |
S |
N |
I |
N |
D |
pt026549_POPTR_ |
R |
V |
N |
Q |
L |
Q |
N |
M |
N |
H |
Q |
L |
S |
E |
K |
V |
I |
H |
L |
L |
E |
S |
N |
H |
Q |
T |
L |
Q |
E |
N |
S |
Q |
L |
K |
E |
K |
V |
S |
S |
L |
Q |
V |
V |
L |
S |
D |
L |
L |
T |
P |
L |
R |
N |
V |
D |
D |
- |
- |
G |
D |
|
AT5G60830.1 |
R |
N |
V |
N |
Y |
L |
R |
G |
E |
P |
S |
N |
R |
P |
T |
N |
S |
P |
F |
A |
S |
S |
T |
M |
I |
D |
A |
M |
Y |
A |
T |
S |
D |
Y |
Y |
S |
S |
N |
Y |
L |
L |
A |
F |
V |
C |
R |
Y |
pt026549_POPTR_ |
C |
N |
S |
I |
H |
L |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|