fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G60830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026549 not found in 164aa AT5G60830.1 1st_1st 0.258666666 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G60830.1     ME---------------------SSSVHRSHCFDILDGVPLHDDHFNSAFLPNTDFNVHL
pt026549_POPTR_ MQPIVESTNHTPTQANISENPESSSSLFDKFLINSLIHVPLHIPS------PNT------
                *:                     ***:. .. :: *  ****         ***      

AT5G60830.1     QSNVSTRINNQSHLDPNAENIFHNEGLAPEERRARRMVSNRESARRSRMRKKKQIEELQQ
pt026549_POPTR_ -SSVST---DSTLAEPRDQQL----GIS-NEKKLRRMISNRESARRSRMRRKKQIEDLQY
                 *.***   :.:  :*. :::    *:: :*:: ***:************:*****:** 

AT5G60830.1     QVEQLMMLNHHLSEKVINLLESNHQILQENSQLKEKVSSFHLLMADVLLPMRNAESNIND
pt026549_POPTR_ RVNQLQNMNHQLSEKVIHLLESNHQTLQENSQLKEKVSSLQVVLSDLLTPLRNVDD--GD
                :*:**  :**:******:******* *************::::::*:* *:**.:.  .*

AT5G60830.1     RNVNYLRGEPSNRPTNSPFASSTMIDAMYATSDYYSSNYLLAFVCRY
pt026549_POPTR_ CNSIHLK----------------------------------------
                 *  :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G60830.1     M E - - - - - - - - - - - - - - - - - - - - - S S S V H R S H C F D I L D G V P L H D D H F N S A F L P N T D F N V H L
pt026549_POPTR_    M Q P I V E S T N H T P T Q A N I S E N P E S S S S L F D K F L I N S L I H V P L H I P S - - - - - - P N T - - - - - -
 
AT5G60830.1     Q S N V S T R I N N Q S H L D P N A E N I F H N E G L A P E E R R A R R M V S N R E S A R R S R M R K K K Q I E E L Q Q
pt026549_POPTR_    - S S V S T - - - D S T L A E P R D Q Q L - - - - G I S - N E K K L R R M I S N R E S A R R S R M R R K K Q I E D L Q Y
 
AT5G60830.1     Q V E Q L M M L N H H L S E K V I N L L E S N H Q I L Q E N S Q L K E K V S S F H L L M A D V L L P M R N A E S N I N D
pt026549_POPTR_    R V N Q L Q N M N H Q L S E K V I H L L E S N H Q T L Q E N S Q L K E K V S S L Q V V L S D L L T P L R N V D D - - G D
 
AT5G60830.1     R N V N Y L R G E P S N R P T N S P F A S S T M I D A M Y A T S D Y Y S S N Y L L A F V C R Y
pt026549_POPTR_    C N S I H L K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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