fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G60850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022898 not found in 329aa AT5G60850.1 1st_1st 0.350951374 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G60850.1     MQDIHDFSMNGVGGGGGGGGRFFGGGIGGGGGGDRRMRAHQNNILNHH---QSLKCPRCN
pt022898_POPTR_ MQDTHSI---------GGGGRLF----SGGGGGDRKLRPH------HHQNQQALKCPRCD
                *** *.:         *****:*    .*******::*.*      **   *:******:

AT5G60850.1     SLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQ-VPSSS-
pt022898_POPTR_ SLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSRPKQNTPITTC
                **********************.**********************:***:.** .* :: 

AT5G60850.1     -----SADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASN----STTVAAVSVTAAAEVA
pt022898_POPTR_ DTITASSTTPQELQEQHQQRDHKSSDSHSSSESSSLTATNNTNANTTAEAVSALSVSSVV
                     *: .*   *::*: .::.*:.************:*    .**. ***. :.:.*.

AT5G60850.1     S----------------SVIPGFDMPNMKIYGNGIEWSTLLGQGSSAGGVFSEIGGFPAV
pt022898_POPTR_ SNNLLNGIVESKIFPHGNVNPSFE-------------PSLLEQGSDC-GIFSEIGSFTSL
                *                .* *.*:             .:** ***.. *:*****.*.::

AT5G60850.1     SAIETTPFGFGGKFVN--------------QDDHLKLEGETVQQQQFG------DRTAQV
pt022898_POPTR_ ITSTNDLFGFSNMMSQHQPPHQQQGLEHHVQHNQNQQQWQNHQQQEMTGGGGLIDQTVHV
                 :  .  ***.. : :              *.:: : : :. ***::       *:*.:*

AT5G60850.1     EFQG----RSSDPNMG-FEPLDWGSGGGDQ--TLFDLTSTVDHAYWSQSQWTSSDQDQSG
pt022898_POPTR_ ELSALPSSRSTKNDDGEFGALDWQLGSGDQATSLFDLPNAVDQAYWSQSQW--NDQDHPS
                *:..    **:. : * * .***  *.***  :****..:**:********  .***:..

AT5G60850.1     LYLP
pt022898_POPTR_ LYIP
                **:*
BoxShade v3.31 C (beta, 970507) Output
AT5G60850.1     M Q D I H D F S M N G V G G G G G G G G R F F G G G I G G G G G G D R R M R A H Q N N I L N H H - - - Q S L K C P R C N
pt022898_POPTR_    M Q D T H S I - - - - - - - - - G G G G R L F - - - - S G G G G G D R K L R P H - - - - - - H H Q N Q Q A L K C P R C D
 
AT5G60850.1     S L N T K F C Y Y N N Y N L S Q P R H F C K N C R R Y W T K G G V L R N V P V G G G C R K A K R S K T K Q - V P S S S -
pt022898_POPTR_    S L N T K F C Y Y N N Y N L S Q P R H F C K S C R R Y W T K G G V L R N V P V G G G C R K T K R S R P K Q N T P I T T C
 
AT5G60850.1     - - - - - S A D K P T T T Q D D H H V E E K S S T G S H S S S E S S S L T A S N - - - - S T T V A A V S V T A A A E V A
pt022898_POPTR_    D T I T A S S T T P Q E L Q E Q H Q Q R D H K S S D S H S S S E S S S L T A T N N T N A N T T A E A V S A L S V S S V V
 
AT5G60850.1     S - - - - - - - - - - - - - - - - S V I P G F D M P N M K I Y G N G I E W S T L L G Q G S S A G G V F S E I G G F P A V
pt022898_POPTR_    S N N L L N G I V E S K I F P H G N V N P S F E - - - - - - - - - - - - - P S L L E Q G S D C - G I F S E I G S F T S L
 
AT5G60850.1     S A I E T T P F G F G G K F V N - - - - - - - - - - - - - - Q D D H L K L E G E T V Q Q Q Q F G - - - - - - D R T A Q V
pt022898_POPTR_    I T S T N D L F G F S N M M S Q H Q P P H Q Q Q G L E H H V Q H N Q N Q Q Q W Q N H Q Q Q E M T G G G G L I D Q T V H V
 
AT5G60850.1     E F Q G - - - - R S S D P N M G - F E P L D W G S G G G D Q - - T L F D L T S T V D H A Y W S Q S Q W T S S D Q D Q S G
pt022898_POPTR_    E L S A L P S S R S T K N D D G E F G A L D W Q L G S G D Q A T S L F D L P N A V D Q A Y W S Q S Q W - - N D Q D H P S
 
AT5G60850.1     L Y L P
pt022898_POPTR_    L Y I P
 
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