fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G60850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046422 not found in 300aa AT5G60850.1 1st_1st 0.393234672 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G60850.1     MQDIHDFSMNGVGGGGGGGGRFFGGGIGGGGGGDRRMRAHQNNILNHHQSLKCPRCNSLN
gm046422_Glyma1 MQQIHSMP----------GGRFF----SGSGSADRRLRPHHQN----QQALKCPRCDSLN
                **:**.:.          *****    .*.*..***:*.*::*    :*:******:***

AT5G60850.1     TKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKR-SKTKQVPSSSSADK
gm046422_Glyma1 TKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSSKPNKITPSETASP
                ******************************************:** **.:::..*.:*. 

AT5G60850.1     PTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTTVAAVSVTAAAEVASSVIPGFDMPNMK
gm046422_Glyma1 PPPPHPDHN----NNSNSHSSSESSSLTAAAATTTEAVS--APETLNSDSNNNNNMQESK
                *...: **:    ..:.************: :**. ***  *.  : *.   . :* : *

AT5G60850.1     IYGNGIEWSTLLGQGS-SAGGVFSEIGGFPAVSAIETTP---------FGFGG-------
gm046422_Glyma1 LLIPALETNNSLEQGTGDCGGIFSEIG--PFTSLITTTTSTNEPLGSGFGFGNSTLPDAS
                :   .:* .. * **: ..**:*****  * .* * **.         ****.       

AT5G60850.1     -------KFVNQDDHLKLEGETVQQQQFGDRTAQVEFQGRSSDPNMGFEPLDWGSGGGDQ
gm046422_Glyma1 SFQWHYQKVSSNNEELKLP-----ENSFLDHTVDLSGMHSKTSHGGGFGSLDW-QGGADQ
                       *. .:::.***      ::.* *:*.::.    .:. . ** .*** .**.**

AT5G60850.1     TLFDLTSTVDHAYWSQSQWTSSDQDQSGLYLP
gm046422_Glyma1 GLFDLPNTVDHAYWSHTHWSDHDNSSSLFHLP
                 ****..********:::*:. *:..* ::**
BoxShade v3.31 C (beta, 970507) Output
AT5G60850.1     M Q D I H D F S M N G V G G G G G G G G R F F G G G I G G G G G G D R R M R A H Q N N I L N H H Q S L K C P R C N S L N
gm046422_Glyma1    M Q Q I H S M P - - - - - - - - - - G G R F F - - - - S G S G S A D R R L R P H H Q N - - - - Q Q A L K C P R C D S L N
 
AT5G60850.1     T K F C Y Y N N Y N L S Q P R H F C K N C R R Y W T K G G V L R N V P V G G G C R K A K R - S K T K Q V P S S S S A D K
gm046422_Glyma1    T K F C Y Y N N Y N L S Q P R H F C K N C R R Y W T K G G V L R N V P V G G G C R K S K R S S K P N K I T P S E T A S P
 
AT5G60850.1     P T T T Q D D H H V E E K S S T G S H S S S E S S S L T A S N S T T V A A V S V T A A A E V A S S V I P G F D M P N M K
gm046422_Glyma1    P P P P H P D H N - - - - N N S N S H S S S E S S S L T A A A A T T T E A V S - - A P E T L N S D S N N N N N M Q E S K
 
AT5G60850.1     I Y G N G I E W S T L L G Q G S - S A G G V F S E I G G F P A V S A I E T T P - - - - - - - - - F G F G G - - - - - - -
gm046422_Glyma1    L L I P A L E T N N S L E Q G T G D C G G I F S E I G - - P F T S L I T T T T S T N E P L G S G F G F G N S T L P D A S
 
AT5G60850.1     - - - - - - - K F V N Q D D H L K L E G E T V Q Q Q Q F G D R T A Q V E F Q G R S S D P N M G F E P L D W G S G G G D Q
gm046422_Glyma1    S F Q W H Y Q K V S S N N E E L K L P - - - - - E N S F L D H T V D L S G M H S K T S H G G G F G S L D W - Q G G A D Q
 
AT5G60850.1     T L F D L T S T V D H A Y W S Q S Q W T S S D Q D Q S G L Y L P
gm046422_Glyma1    G L F D L P N T V D H A Y W S H T H W S D H D N S S S L F H L P
 
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